Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01042 ATGGGAGCAGCGATTCTCCCAGATCTCGGAACTGAGATTCTCATTCCCGTCTGCGCGGTCATTGGAATCGCCTTCGCCCTCTTCCAGTGGCTCCTCGTCTCCAAGGTCAAACTCTCTGCCGTCAGAGACGCTTCTCCCAACGCCGCCGCCAAGAATGGCTACAACGACTACCTCATCGAAGAAGAGGAGGGCATCAACGACCATAACGTCGTTGTCAAATGCGCCGAAATACAGAACGCCATTTCCGAAGGAGCAACCTCTTTCCTTTTTACTGAATACAAGTATGTAGGAATCTTCATGGTGGCTTTTGCCATTTTGATATTCCTCTTCCTTGGTTCAGTGGAGGGATTCAGCACAAGCCCCCAGGCTTGCACATACGATAAAACTAAAACGTGTAAGCCAGCACTGGCAACGGCTATTTTCAGCACCATATCTTTCCTGCTTGGTGGCGTCACATCACTTGTTTCTGGATTCCTTGGAATGAAAATTGCAACTTACGCCAATGCAAGAACCACCTTGGAGGCAAGAAAGGGTGTTGGGAAGGCCTTCATTACGGCTTTTAGATCTGGTGCTGTTATGGGTTTTCTCCTAGCCGCAAATGGTCTTCTAGTTCTTTACATTGCCATCAACTTGTTTAAGATCTATTATGGTGATGACTGGGGTGGTCTTTTTGAGGCCATAACTGGTTATGGTCTCGGTGGGTCTTCTATGGCTTTGTTTGGAAGAGTTGGTGGAGGTATTTATACCAAGGCTGCTGATGTTGGTGCTGATCTCGTTGGCAAGGTTGAGAGAAACATTCCCGAAGATGATCCAAGAAATCCCGCTGTGATTGCTGACAATGTTGGTGACAATGTCGGAGATATAGCTGGTATGGGATCTGATCTGTTTGGTTCATATGCGGAGTCATCTTGTGCTGCACTTGTTGTTGCTTCCATCTCCTCATTTGGGTTGAATCATGAGTTGACTGCAATGCTCTACCCTCTCATTGTCAGTTCTGTGGGTATCCTTGTTTGTTTGCTCACCACCTTATTTGCAACTGACTTCTTTGAGATCAAGGCTGTGAAGGAGATTGAGCCTGCATTGAAAAAACAGCTTGTTATTTCCACTGTGCTGATGACTATTGGGGTTGCAGTTGTTAGTTTTGTTGCACTTCCAACTTCCTTCACTATCTTCAATTTTGGAGTGCAGAAAGACGTCAAGAGCTGGCAGCTATTTTTGTGTGTTGCTGTTGGTCTTTGGGCAGGACTTATTATCGGATTTGTAACTGAGTACTATACTAGTAACGCATATAGTCCTGTTCAAGACGTTGCTGACTCCTGCAGAACTGGTGCTGCAACTAATGTTATATTTGGCCTTGCCTTAGGATACAAGTCTGTTATCATTCCAATTTTTGCTATAGCAATTAGTATTTTTGTTAGTTTCACCTTTGCTGCCATGTATGGTATTGCCGTTGCTGCACTTGGGATGCTGAGTACCATTGCAACTGGGTTGGCCATAGACGCATATGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCTGGCATGAGTCACAGAATTCGTGAGAGAACTGATGCTCTTGATGCTGCTGGTAACACTACAGCTGCAATTGGGAAGGGCTTTGCCATTGGTTCTGCCGCCCTTGTATCTCTGGCCCTTTTTGGTGCCTTTGTGAGCCGAGCATCTATTACGACTGTTGATGTGTTGACTCCAAAGGTTTTCATTGGTTTAATTGTGGGGGCAATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTGGGAAGTGCTGCTCTGAAGATGGTTGAGGAAGTGCGCAGGCAATTCAATACCATCCCAGGGTTGATGGAGGGAACTGCCAAGCCTGACTATGCTACGTGTGTTAAGATCTCTACTGATGCTTCCATTAAAGAAATGATTCCACCTGGTGCTCTTGTCATGCTTACACCTCTTGTTGTTGGGATCCTTTTTGGTGTCGAAACACTTTCTGGTGTCCTCGCTGGATCTTTGGTATCTGGTGTACAGATTGCCATCTCTGCATCCAACACCGGCGGTGCATGGGATAATGCAAAGAAGTACATTGAGGCTGGTGCTTCTGAGCATGCCAGAACCCTTGGTCCAAAAGGGTCAGATTGCCACAAGGCAGCAGTTATTGGTGACACCATTGGAGACCCTCTCAAGGATACATCTGGTCCCTCACTTAACATCCTTATCAAGCTGATGGCAGTTGAGTCTCTTGTTTTTGCCCCTTTCTTTGCTACCCATGGTGGTTTACTCTTCAAGATCTTCTAA 2301 0.462 MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACTYDKTKTCKPALATAIFSTISFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01042 766 Pfam Inorganic H+ pyrophosphatase 23 751 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vian1g01042 766 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vian1g01042 766 PIRSF H+-PPtase 12 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vian1g01042 766 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vian1g01042 766 NCBIfam V-type H(+)-translocating pyrophosphatase 11 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01042 Vian-Chr1 11144573 11148746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01042 4 629 Primary Pumps ATPases AT1G15690 87.440 0.0 1113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01042 K23025 - gmx:100775864 1432.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01042 1 11144573 11148746 Vian1g01042 1 11144573 11148746 ECH