Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00962 ATGGCTGCTCTCTTGAGAAGGTTTGCGAGAGCTACTCCGATACCGTTCGCTGCCCAATCCAACTCCTCTCACTCCAATCTCCGCCTTCCCTTCGCTGCTATCGCCGCCATTTCCGGCGGAGTCTCCTTCCTTTACTACCATTCCTCTCCCAGCCTCGTTCATTCGCAACAAACAGAACAAGAGGAAAGTAGAAATACCGGTGAGTGTGGGTCGCTCAACCCGGACAAATGGATCGAGTTTAAGTTGCAGGACACCGCCAGGGTTAGTCACAATACTCAGCTATTCAGGTTTTCGTTTGATCCCACTCAGAAATTGGGTCTGGATATTGCTTCTTGCATCCTTACAAGGGCTCCATTGGGACAAGATGCTGAAGGAAAACCAAAATTTGTTGTACGCCCGTATACTCCTATTTCAGATCCAGAATCGAAAGGATATTTTGACTTGCTAATCAAGGTGTATCCTGAAGGGAAGATGAGCCAGCATTTTGCAAGCTTAAAACCAGGTGATGTTGTTGAAGTGAAAGGGCCCAATGAAAAACTCAGATATACTCCTAATATGAAGAAGCATATTGGCATGATTGCTGGAGGCTCAGGAATTACTCCTATGCTTCAGGTAATTGAAGCTATTTTGAAGAATCCTGACGACAAAACTCAGGTATCATTACTTTATGCTAATGTCTCCCCAGATGACATTCTGCTTAAACAAAAGCTTGACATTCTAGCAACAAGCCACCCAAACTTAAAGATATTCTACACTGTTGATAATCCAACAAAAAATTGGAGAGGAGGTGCAGGTTACATATCAAAGGATATGGTTGTGAAAGGCTTACCTGCTCCTAGTGATGATACTCTTATACTGGTATGTGGACCTCCTGGGATGATGAAACAAATATCTGGAGAAAAGGCCAAGGACTGGACACAAGGAGAGGTTTCTGGCATCCTGAAAGAGGCTGGATACACTGAACAAATGGTTTACAAATTCTGA 984 0.44 MAALLRRFARATPIPFAAQSNSSHSNLRLPFAAIAAISGGVSFLYYHSSPSLVHSQQTEQEESRNTGECGSLNPDKWIEFKLQDTARVSHNTQLFRFSFDPTQKLGLDIASCILTRAPLGQDAEGKPKFVVRPYTPISDPESKGYFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPNEKLRYTPNMKKHIGMIAGGSGITPMLQVIEAILKNPDDKTQVSLLYANVSPDDILLKQKLDILATSHPNLKIFYTVDNPTKNWRGGAGYISKDMVVKGLPAPSDDTLILVCGPPGMMKQISGEKAKDWTQGEVSGILKEAGYTEQMVYKF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00962 327 Pfam Oxidoreductase FAD-binding domain 80 182 IPR008333 -
Vian1g00962 327 FunFam NADH-cytochrome b5 reductase 174 327 - -
Vian1g00962 327 Gene3D - 173 327 IPR039261 -
Vian1g00962 327 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 75 183 IPR017927 GO:0016491
Vian1g00962 327 SUPERFAMILY Riboflavin synthase domain-like 71 185 IPR017938 -
Vian1g00962 327 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 169 325 IPR039261 -
Vian1g00962 327 CDD cyt_b5_reduct_like 80 327 - -
Vian1g00962 327 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 132 139 IPR001709 GO:0016491
Vian1g00962 327 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 284 292 IPR001709 GO:0016491
Vian1g00962 327 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 191 210 IPR001709 GO:0016491
Vian1g00962 327 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 229 240 IPR001709 GO:0016491
Vian1g00962 327 Pfam Oxidoreductase NAD-binding domain 192 297 IPR001433 GO:0016491
Vian1g00962 327 FunFam NADH-cytochrome b5 reductase 70 173 - -
Vian1g00962 327 PANTHER NADH-CYTOCHROME B5 REDUCTASE 48 327 IPR001834 GO:0016491
Vian1g00962 327 PRINTS Cytochrome B5 reductase signature 168 182 - -
Vian1g00962 327 PRINTS Cytochrome B5 reductase signature 284 292 - -
Vian1g00962 327 PRINTS Cytochrome B5 reductase signature 229 240 - -
Vian1g00962 327 PRINTS Cytochrome B5 reductase signature 132 139 - -
Vian1g00962 327 PRINTS Cytochrome B5 reductase signature 191 210 - -
Vian1g00962 327 Gene3D Translation factors 70 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00962 Vian-Chr1 10134727 10139836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00962 71 327 NADPH P450 reductases AT5G17770 43.243 2.95e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00962 K00326 - gmx:100781191 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00962 1 10134727 10139836 Vian1g00962 1 10134727 10139836 ECH