Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00943 ATGTCCTTCACTCTAGTATTAAAAAGCCAAGCCACTAACAACCAACATAACAAAGCAGATAAGAAGCAAACCCAACCCAGACCCTGCTCTCTCTGCACCACTGTGTCTGTGTGCTGTGTGTGCTGTGTGTGCTGTGTGTGCTGTGTCCACACCAAGGATATACAGAAACCAACCAAGCAACATTTTCCCTCTTCTTGTCTTCTCTCAACTACAAAAACCATACCATTTATTATGGACGCCCTCTTCTCCTCCCTCTCCTTCCTCTTCCTTCTCTTCCTCCTCAAGCTCACCGTCCTCCTCTGGTGGCGACCCAGAAAAATTCAAGGTCACTTCTCCAAGCAAGGCATCCGAGGACCCCCTTATCGTTTCTTCATTGGCAACGTTAAGGAACTTGTCGCCATGATGTTGAAGGCCTCCTCCAAACCCATGCCTTTCTCCCACAACATTCTCCCCAGAGTCCTTTCCTTCTACCATCACTGGAAGAAAATTTATGGTGCAACATTCCTAGTTTGGTTTGGACCCACCGTTCGTCTCACCGTCTCTGATCCAGACCTCATCCGGGAAATCTTCACATCCAAGTCAGAATTTTACGAGAAAAACGAAGCTCCACCCCTCGTGAAGCAGCTGGAAGGCGATGGCCTCCTCAGCCTCAAAGGAGAAAAATGGGCTCACCATCGAAGGATTATCTCTCCCACTTTTCACATGGAGAATCTAAAATTGTTGATACCGGTGATGGCTACAAGCGTGGTTGAGATGTTGGAAAAGTGGTCGGCAATGGGTGAGAAGGGTGAGGTGGAAATCGAAGTTTCGGAGTGGTTTCAGAGGCTGACAGAAGACGTGATTACGAGGACGGCATTCGGAAGCAGCTACGAAGACGGGAAAGCCATTTTCCGGTTACAGGGTCAGCAGATGGACTTGGCTGCCGACGCCTTCCAGAAAGTATTCATTCCAGGTTACAGATTTGTACCCACAAGGAGGAACATAAAGTCGTGGAAGTTGGAGAAGGAGATAAAGAAATCGCTGGTGAAACTGATAGAGCGACGGAGGGAGAATTCGGAGAAGGTGGTGGAGAAGGGGGCGAAGGATTTGTTGGGGCTAATGATTGAGGCGTCCAACACGAATTCGACGAATGTGACAGTGGATGACATTGTGGAAGAGTGCAAGAGCTTTTTCTTTGCAGGGAAACAGACCACATCCAACCTGCTGACGTGGACGACCATTCTCCTAGCTATGCACCCACAGTGGCAGGTACGGGCACGTGAGGAGGTTCTGAAGATGTGTGGATCACGTGACCTTCCGACCAAAGACCATGTCGCAAAGCTGAGGACGGTGAGCATGATTGTGAACGAGTCGCTAAGGCTGTACCCGCCGACGATCGCCACAATCAGACGTGCCAAGACGGACGTGGAGTTGGGGGGGTACAAGATACCACGTGGGACGGAACTGCTGGTTCCAATCCTGGCCGTTCATCACGATCAGGCCATATGGGGAAACGATGCGAACGAGTTCAATCCTGGGCGTTTCAGCCAGGGGGTGGCCCGCGCCGCGAACCATCCTCTGGCCTTCATACCCTTTGGAGTGGGTGTGCGCACATGCATAGGACAAAACCTGGCAGTGCTACAAACCAAACTGGCCCTCGCAATCATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAGCACGCACCAACGGTCCTCATGCTACTCTACCCTCAGTACGGCGCACCAATCATTTTCCAACGCTTCTCCACTCCTCCGCCTCCTCAACCATCCTCCTCCTCTCCTCCTCCTCCTCCTACTCTTCTCAACGCAACTGTATAG 1827 0.5112 MSFTLVLKSQATNNQHNKADKKQTQPRPCSLCTTVSVCCVCCVCCVCCVHTKDIQKPTKQHFPSSCLLSTTKTIPFIMDALFSSLSFLFLLFLLKLTVLLWWRPRKIQGHFSKQGIRGPPYRFFIGNVKELVAMMLKASSKPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFHMENLKLLIPVMATSVVEMLEKWSAMGEKGEVEIEVSEWFQRLTEDVITRTAFGSSYEDGKAIFRLQGQQMDLAADAFQKVFIPGYRFVPTRRNIKSWKLEKEIKKSLVKLIERRRENSEKVVEKGAKDLLGLMIEASNTNSTNVTVDDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPQWQVRAREEVLKMCGSRDLPTKDHVAKLRTVSMIVNESLRLYPPTIATIRRAKTDVELGGYKIPRGTELLVPILAVHHDQAIWGNDANEFNPGRFSQGVARAANHPLAFIPFGVGVRTCIGQNLAVLQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFQRFSTPPPPQPSSSSPPPPPTLLNATV 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00943 608 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 525 534 IPR017972 GO:0005506|GO:0016705
Vian1g00943 608 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00943 608 PRINTS P450 superfamily signature 393 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00943 608 PRINTS P450 superfamily signature 532 543 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00943 608 PRINTS P450 superfamily signature 523 532 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00943 608 PANTHER CYTOCHROME P450 FAMILY MEMBER 94 577 - -
Vian1g00943 608 Pfam Cytochrome P450 154 564 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00943 608 CDD CYP734 154 578 - -
Vian1g00943 608 SUPERFAMILY Cytochrome P450 111 582 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00943 608 FunFam Cytochrome P450 734A1 101 585 - -
Vian1g00943 608 PRINTS E-class P450 group I signature 532 555 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00943 608 PRINTS E-class P450 group I signature 161 180 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00943 608 PRINTS E-class P450 group I signature 276 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00943 608 PRINTS E-class P450 group I signature 522 532 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00943 608 PRINTS E-class P450 group I signature 402 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00943 608 PRINTS E-class P450 group I signature 382 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00943 608 MobiDBLite consensus disorder prediction 586 608 - -
Vian1g00943 608 Gene3D Cytochrome P450 100 584 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00943 Vian-Chr1 9953039 9956214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00943 85 586 Cytochrome P450 AT2G26710 77.559 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00943 K15639 - gmx:100780027 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00943 1 9953039 9956214 Vian1g00943 1 9953039 9956214 ECH