Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00895 ATGGATTCAACTCGTGTCTCTCATAACCTTGGGGATCCCAAAATTCGTCAAGTTGGTTTCTTCGTTCCCGAATCCTCCACCACCGATTCCCACAAGATACTGTCGCCAAGTCATCTTCCCGTTCCGGAGATGCAGAATTCCGTCCATGGCCAAGTGACATCTCGGAGCTATGATCCCTCGGAAAACCGAAACCTTGAAACTGGCATTGAAAAGAGGGAAGATGAAGAGATAGAGGTTATAAAATCAAGGTCAAAGCCGCTGAAAGAAAAAACTACCAAAGCGGAGAGGCGAGCCTTGCAAGAAGCACAGAGAGCTGCTAAAGCTGCTTCTTCTAACGTCGAGGGAAGTAAGGCTGTTGCTGGAACTGGTAGAGCTGCCTTGGGTAAAAGTACAAAGCAGTCTTCACAAAAGAAAGCTGGTCCTTCTTCTCCAGTGGCTGCTGATAAAAAAGCAGGAGATCGACCTTTGGATAAAGACAGGAAAAAGGATGCTCCTCATCCACGATTGCAATTTGATGATGAAAGCCGAATGGAAAGGGCTAGAAGGCGTGCAGTAGTCAATCCAACTGAATCTAGAACCAGAGTTGAATTATTTCAGCATTTGCCTCAATATGAACATGGGACTAAGCTTTCTAGTCTTGAATCAAAGTTTTTCCACCTTGATTTAGTTCACCCTTCTGTATTTGAGGTAGGTCTTCGTTATTCGGCAGGAGAAATATCTGGGGGTAATGCTCGTTGTATAGCAATGCTAAGAGCACTTCAAGATGCCATTAGAGATTACTGCACAGATCATGAAAAGGCCCTTGTTAGGAATTTAACTGCAAAAATCAACAGTTATGTTTCATTCTTTGCTGAATGCAGACCACTTTCAATGAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTCGTATTGTCAACCTGTCTTTAAATTATTCTGAGTTTGAGGCAAAAACAACCCTGTGTTCAGATATTGACCGGTTTATAAATGAAAAAATAATTCTTGCTGATAAGGTGATTGTCCGACATGCTTTTACAAAGATTAAGGATGGGGATGTGCTTCTCACATATGGATTGTCATGTGTTGTTGAGATGATTCTTTTATATGCCCATGAACTGGGTAAAAAGTTTCGTGTTGTCGTGGTCGATTCCCAGCCAAGGCTAGAAGGTCAGGCCTTGCTTCGTAGGCTAGTGGCTAAGGGTCTAAGTTGCACATATACTCATATAAATGCTGTTTCTTATATCATGCATGAGGTCACACGAGTTCTTCTGGGAGCTTCTGCAGTTTTGTCTAATGGAACTGTATATTCAAGGGTTGGGACTTCTTGTGTTGCAATGGTGGCTCATGCATTTCGTGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTCATGAAAGGGTGCTACTGGATTCAATATGTTCTAACGAACTAGGTGACCCAGATGCTATTGCCAGGGTTCCTGGACGAATAGATGTCAATTATCTGGATAATTGGGCCAGTGAAGACAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTGTCGGTTATCGTGACGGATTATGGCATGCTTCCTCCTACAAGCGTGCCTGTAATAGTACGTGAATATCGAGAGCATTTGTTGATGTAG 1644 0.4227 MDSTRVSHNLGDPKIRQVGFFVPESSTTDSHKILSPSHLPVPEMQNSVHGQVTSRSYDPSENRNLETGIEKREDEEIEVIKSRSKPLKEKTTKAERRALQEAQRAAKAASSNVEGSKAVAGTGRAALGKSTKQSSQKKAGPSSPVAADKKAGDRPLDKDRKKDAPHPRLQFDDESRMERARRRAVVNPTESRTRVELFQHLPQYEHGTKLSSLESKFFHLDLVHPSVFEVGLRYSAGEISGGNARCIAMLRALQDAIRDYCTDHEKALVRNLTAKINSYVSFFAECRPLSMSMGNAIRFVKSRIVNLSLNYSEFEAKTTLCSDIDRFINEKIILADKVIVRHAFTKIKDGDVLLTYGLSCVVEMILLYAHELGKKFRVVVVDSQPRLEGQALLRRLVAKGLSCTYTHINAVSYIMHEVTRVLLGASAVLSNGTVYSRVGTSCVAMVAHAFRVPVLICCEAYKFHERVLLDSICSNELGDPDAIARVPGRIDVNYLDNWASEDNLRLLNLMYDATPSDYVSVIVTDYGMLPPTSVPVIVREYREHLLM 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00895 547 MobiDBLite consensus disorder prediction 26 188 - -
Vian1g00895 547 MobiDBLite consensus disorder prediction 64 102 - -
Vian1g00895 547 MobiDBLite consensus disorder prediction 150 188 - -
Vian1g00895 547 MobiDBLite consensus disorder prediction 127 141 - -
Vian1g00895 547 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 49 544 - -
Vian1g00895 547 MobiDBLite consensus disorder prediction 26 63 - -
Vian1g00895 547 Pfam Initiation factor 2 subunit family 239 531 IPR000649 GO:0044237
Vian1g00895 547 Gene3D - 335 541 IPR042529 -
Vian1g00895 547 SUPERFAMILY NagB/RpiA/CoA transferase-like 222 541 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00895 Vian-Chr1 9331077 9334999 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00895 77 547 Eukaryotic Initiation Factors Gene Family AT5G38640 68.134 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00895 K03680 - gmx:100795256 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00895 1 9331077 9334999 Vian1g00895 1 9331077 9334999 ECH