Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00875 ATGGAGATTTCTGCCATGGCTTCTTCAGCTACTCCAAGACCTTCTCTTCCAACTCCTTCTTCACACCCAGTAGTCACCACTTTTACCAAACCTCAACTCAGACGCAACCACATAGCACTGCCAACCTCATCCACCATTTCGCTCCTCGCTCTCTTCGCCCCTCCCAACGAAGCCAAAGCCGCTGTCTCCATCGCCAAGGATCAGATTGTTTCGTCTCTCACCCAGGTTGAGAAAACGATTGACCAGGTTCAGGAAGTGGGTTCGAATGTTCTGGACACGGCACAGCGTGTTGCTGAGGTAATTGGGAACGCTTTGAAACCTGGTATCGAAACGGCGTTGCCGATTGTGCAGCAAGCTGGGGAAGAGGCCTTGAAAATTGCTTCCCCTGCCATTTCTGAAGCTTCCAAGAAAGCCCAAGAAGCACTGCAAAGCTCTGGTGTTGATACCCAACCTGTTATCACTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACGACCAAGGTGATTGATGTTGCCAAGCCAATAGCTTCTTCAACCGTTGAAACCATATCCTCTTCAGACCCTACTGTGATTGCTGGAACTGCAGGAGCACTATTCGTTGCCTACCTCCTGATTCCTCCTATCTGGTCTGTCATCTCCTCTAATCTTCGTGGTTACAAAGGAGACCTAACTCCTGCTCAAGCCCTTGATTTGATATCTGCACAAAACTACGTTTTGATTGATATCAGGTCAGAGAAAGATAAGGACAAGACTGGTATCCCTCGCCTTCCCTCTAGTGCTAAAAACAGGCTGGTTGCCATTCCTTTGGAAGAACTGCCAAGTAAGCTCAAAGGGCAGGTGAAGAATGTGAAGAAATTGGAAGCTGAAGTAGTGGCTTTGAAGATTTCTTATCTGAAGAAAATCAACAAAGGCACCAACGTTGTGATCCTGGACTCGTATTCGGACGTAGCAAAAACAGTGGGAAGAACACTGACTAACCTTGGTTTTAAGAACACATGGATCGTTGCTGATGGATTCTCTGGGAACAAAGGGTGGTTGCAGAGTAGATTAGGAACAGATTCTTATAACTTTTCGTTCGCAGAGGTGCTGTCACCATCCAGGATCATCCCTGCATCTGTGAGAGCTTTTGGCACAACTAGCCAATCCAGCACTAAGCTTCTTCCTGGGGCTGACTAA 1179 0.4758 MEISAMASSATPRPSLPTPSSHPVVTTFTKPQLRRNHIALPTSSTISLLALFAPPNEAKAAVSIAKDQIVSSLTQVEKTIDQVQEVGSNVLDTAQRVAEVIGNALKPGIETALPIVQQAGEEALKIASPAISEASKKAQEALQSSGVDTQPVITAAKTVADAAQQTTKVIDVAKPIASSTVETISSSDPTVIAGTAGALFVAYLLIPPIWSVISSNLRGYKGDLTPAQALDLISAQNYVLIDIRSEKDKDKTGIPRLPSSAKNRLVAIPLEELPSKLKGQVKNVKKLEAEVVALKISYLKKINKGTNVVILDSYSDVAKTVGRTLTNLGFKNTWIVADGFSGNKGWLQSRLGTDSYNFSFAEVLSPSRIIPASVRAFGTTSQSSTKLLPGAD 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00875 392 Gene3D - 221 360 IPR036873 -
Vian1g00875 392 CDD RHOD 228 342 - -
Vian1g00875 392 SMART rhod_4 224 352 IPR001763 -
Vian1g00875 392 MobiDBLite consensus disorder prediction 1 23 - -
Vian1g00875 392 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 39 353 IPR044690 GO:0009704|GO:0071277|GO:0090333
Vian1g00875 392 ProSiteProfiles Rhodanese domain profile. 234 355 IPR001763 -
Vian1g00875 392 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 200 342 IPR036873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00875 5 313 Sulfurtransferasese or Rhodanese AT5G23060 67.097 8.29e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00875 - - gmx:100813363 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00875 1 9125240 9127288 Vian1g00875 1 9125240 9127288 ECH