Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00849 ATGGAGTCTGTGTGGTTCTCCACCACTGGATCTGCTAACCCCCGTTGTGGCTTCTTGGCCGTCTTACTGCTGTCACTGCTCTTGTGCTCAACATTCTCTTCCACGGAAGCCTATGATGCACTTGATCCAACTGGCAACATTACAATCAAATGGGATGTTATAAGCTGGACACCAGACGGTTATATTGCTGTTGTTACAATGTACAACTTTCAACAGTATCGGCATATTCAGGCTCCTGGATGGATACTAGGGTGGACATGGGCAAAGAAGGAAGTAATTTGGAATGTAGTGGGAGGCCAAACCACAGAGCAAGGGGACTGTTCAAGGTTCAAAGGGAACATTCCTCATTGTTGTAAGAAGGATCCAACCGTCGTGGATTTACTGCCTGGAACTCCTTACAACCAGCAGATTGCCAATTGTTGCACTGGAGGAGTCCTAACTTCATGGGCCCAGGACCCTGAACATGCAATAACCTCATTTCAACTTAGTGTTGGTTCTGCAGGAACAACTAACAAAACGGTCAAACTGCCAAGAAATTTTACCCTTAAAGCACCAGGGCCTGGTTATACTTGTGGACCTGCAAAGATTGTGAAACCAACTAAGTTTATTACCAAAGACAAGAGGAGAACCACTCAAGCATTGATGACCTGGAATGTTACGTGCACGTATTCTCAATTCCTAGCTCAGAAGACTCCAACGTGCTGTGTTTCTCTTTCATCCTTCTACAACAGTACAATAGTAAACTGCCCTACCTGCACCTGTGGTTGCCAAAACAAAACAGAACCTGGAAGCTGTGTAGATCCTAATTCCCCACATTTAGCTTCAGTTGTATCACCCCCAGGCAAAGCCATAAATACACCTCTGGTCCGATGCACCAATCACATGTGTCCTATTCGAGTGCATTGGCACGTGAAACTTCAATATAAAGAGTACTGGAGGATCAAGATCACAATCACAAATTTCAATTACATGGTGAATTATTCACAATGGAACCTTGTTGTCCAGCACCCAAACTTTGACAATGTAACTCAGGTTTTCAGCTTTAACTACAAGCCGATAACACCTTATGTGGGCTTAAATGATACTGGTATGTTGTGGGGAGTGAAGTTCTACAATGATTTACTTACTTCAGCAGGACCCCTTGGGAATGTGCAGTCTGAGCTCTTATTCCGGAAGGACAAATCAACCTTCACATTTGATAAGGGATGGGCTTTCCCTCGAAGAATATATTTCAACGGAGATAACTGTGTAATGCCACCTCCTGACGCCTATCCATGGTTGCCAAATGCAAGTTCAAGACTAGTTTTCCCTTTACTAAGCACATTTTTTGGCACTTTATACTGTGTGGTAATGTTATTGACTTAA 1365 0.4359 MESVWFSTTGSANPRCGFLAVLLLSLLLCSTFSSTEAYDALDPTGNITIKWDVISWTPDGYIAVVTMYNFQQYRHIQAPGWILGWTWAKKEVIWNVVGGQTTEQGDCSRFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCTGGVLTSWAQDPEHAITSFQLSVGSAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVKPTKFITKDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNSTIVNCPTCTCGCQNKTEPGSCVDPNSPHLASVVSPPGKAINTPLVRCTNHMCPIRVHWHVKLQYKEYWRIKITITNFNYMVNYSQWNLVVQHPNFDNVTQVFSFNYKPITPYVGLNDTGMLWGVKFYNDLLTSAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRLVFPLLSTFFGTLYCVVMLLT 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00849 454 PIRSF COBRA 12 454 IPR006918 GO:0010215|GO:0016020
Vian1g00849 454 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0016020
Vian1g00849 454 PANTHER PROTEIN COBRA 26 436 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00849 Vian-Chr1 8835828 8839325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00849 19 453 COBRA Gene Family AT3G02210 72.936 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00849 - - vun:114177145 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00849 1 8835828 8839325 Vian1g00849 1 8835828 8839325 ECH
Vian1g00849 1 8835828 8839325 Vian4g00592 4 7128214 7131183 PCT