Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00763 ATGGGATCAGAGGGTGTGGCTCCTGCAGTTGTTGGGACATCAAAAAGCAGGTCTTCTTCTGGTAAAATGAACCAAGGGAAAGTCCCCAGGAAAATTCACAAGGCCGAAAGGGAGAAAATGAAACGTGAACATTTGAATGAACTCTTTCTTGATCTTGCCAATGCACTTGATGTGAATGAGAACAATGGAAAGGCTTCTATATTGTGTGAAGCGGCTAGGTTGCTAAAAGACTTGCTCTCTCAGATCGAGTCCCTCAAGAAAGAGAATGTCACACTGTTGTCTGAATCGCATTATGTGACCATGGAGAAAAATGAGCTGAAGGAGGAGAATTGTAGCCTAGAAACTCAAATTGAGAAACTTCAAGGAGAGATACAGGCAAGAGTTGCTCAATCTAAACCTGACCTGAATGTACCTCCCCATTTGGAACTTGACCCACTGGAGCAGTCAAATTTTCCAGGACAGAGTCTCCTATTGCATACTATGGAACCTAACTTGCAGCAAGGATCTGCAGTTTTGCTTGTCCCTTTTCCCGATCTTCAAGCTTCATTTCCAGCTGCTAATGTTAACGAAGTAGCTCCAAATTCCTCTTCTGTTGTCAGTAAACCGCATGCAAGGTATCCCACAGCAGCAGATTCATGGCCATCACAGTTGCTTGGATAG 660 0.4394 MGSEGVAPAVVGTSKSRSSSGKMNQGKVPRKIHKAEREKMKREHLNELFLDLANALDVNENNGKASILCEAARLLKDLLSQIESLKKENVTLLSESHYVTMEKNELKEENCSLETQIEKLQGEIQARVAQSKPDLNVPPHLELDPLEQSNFPGQSLLLHTMEPNLQQGSAVLLVPFPDLQASFPAANVNEVAPNSSSVVSKPHARYPTAADSWPSQLLG 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00763 219 Coils Coil 75 95 - -
Vian1g00763 219 Coils Coil 103 123 - -
Vian1g00763 219 MobiDBLite consensus disorder prediction 1 32 - -
Vian1g00763 219 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 30 105 IPR036638 GO:0046983
Vian1g00763 219 Gene3D - 21 95 IPR036638 GO:0046983
Vian1g00763 219 PANTHER TRANSCRIPTION FACTOR BHLH47 14 218 - -
Vian1g00763 219 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 29 78 IPR011598 GO:0046983
Vian1g00763 219 MobiDBLite consensus disorder prediction 193 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00763 Vian-Chr1 7979343 7981069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00763 7 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 48.276 1.32e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00763 - - gmx:100782436 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00763 1 7979343 7981069 Vian1g00763 1 7979343 7981069 ECH