Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00757 ATGGGTAAGTCACCTGGAAAATGGATCAAAACCGTACTGTTTGGGAAAAAGTCATCCAAATCCAATATTTCAAAAGGCAGAGAGAAGCTTGTTACTAAAAAAGAAGGAGTAATAGTTACCTCCAAGGTGCCGGAAACGGGTTTGACTTTAGAACCAACCTCTGATGCTATTCCCAATCGCGATGAAGTCCAGGAAGTGGATAACAAAGAAGCAGAAAATGTTTTACCTGACAATCAAGAAATAGACTTAGTAGGATCTACTAATGAAGAGGATGCACTGGATCCCGAGAAAATGAGGCTGGAGGAAGCAGCAACAAAGGCACAAGCTGCTTTCAGGGGTTATTTGGCTCGAAGAGCATTTAGGGCCTTGAAAGGCATAATAAGGCTGCAAGCACTCATTCGTGGGCACTTGGTTAGGAGACAAGCTGTTGTTACATTATGCACTATGTATGGTATTGTCAAGTTTCAAGCACTTGTTCGTGGAGGAAGAGTTAGGCAGTCTAATGTTGGTTCTGAAATCCATGAGAAGTACAATATATTGAACCCTCTGGATGGCAAATTTGTCAAGCCAATTGCTATATCCACGAAAATTACAAAGCTGTCAGCAAATGCATTCATTCTTAAGCTTTTTACTTCGTCAACTACAATAATGGCATTGCGGTTGCAATATGTTCCGGGTGATCCAAATTCAGTCCTAAGTTGGTTGGAGCGCTGGTCAGCATCTCAATTTTGGAAACCAGTTCCCCAACCCAAGAAAATTCAGGATAGCAAGGCTCAAAGAAAGCATGGCAATATTTCAGTTGGAGATACTCAAACGAGTAAGTCAAAACGTACTAACAGGAAGCTTCCTACTTCGAATTTTGACTCAGTCCCAGTGCTAGCAAATCCTGAATTTGAGAAACCCAAAAGAAACTCAAGGAAAATTCCAAGTCAACCCTCAGATCCCGTGCAGGAAAATCCACAAAATGAGCTTGAAAAGGTTAAACGTAACTTGAGAAAGGTTCATAATCCTGTTGCTGAGAATGCTGTTCCTTCAGAAGTTGAAACTGAGATGCCAAAGGAACATTTGGAAAAGGCCACAGTTACCTCATCCCTTGCTGTTTCAGAACAAGAGGTCGTTAGTTTTAATGACAAGGTCAAGAAGGAAGCAGCCTTAACTGTTTCCAGCGTGCAAGATATAGAAACTACTCCAAGACTTTCAGCTAGTAACGAAATGCTTGACACACCAACTAGTAATCAAGTGACTGTGGAATCGAAGCCCTTGACTGAAATTACAACTAAAGATAAAAATATTTCCGATGAAGTAAAATATGAGCCCATAGATTTGCCAGAGCTTATTTGTGGAGATGAAAATTCTCTCTTGACAAATGGAGATTTGAGTCACAAGGAAGATCCAATAGGCAGTGAAAACCAGAAACCGAACAGAAAAGGCTCTAATGTAGCAAAACAGGAACGTGCAGATAATGGAATACAGAATAGTCCAACATTGCCAAGTTACATGGCAGCAACTGAATCTGCAAAGGCAAAGTTAAGGGCACAAGGATCTCCAAGATTTGGACAAGATGGAAGTGAAAGAAACAACCAGACCCGGCGCCATTCTTTGCCATCCTCAACTAACAGCAAAATTAGTTCGCATTCACCCAGGACACACAGACCAGTTCACTCAGGTGGCAAAGGGGGCAACAGAAGCGACAGAACTGTATCATCATCTTCTAGAGATGGGAATGGAAAGGTAATTCAAGCAGAATGGAGGAGGTAA 1758 0.4158 MGKSPGKWIKTVLFGKKSSKSNISKGREKLVTKKEGVIVTSKVPETGLTLEPTSDAIPNRDEVQEVDNKEAENVLPDNQEIDLVGSTNEEDALDPEKMRLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCTMYGIVKFQALVRGGRVRQSNVGSEIHEKYNILNPLDGKFVKPIAISTKITKLSANAFILKLFTSSTTIMALRLQYVPGDPNSVLSWLERWSASQFWKPVPQPKKIQDSKAQRKHGNISVGDTQTSKSKRTNRKLPTSNFDSVPVLANPEFEKPKRNSRKIPSQPSDPVQENPQNELEKVKRNLRKVHNPVAENAVPSEVETEMPKEHLEKATVTSSLAVSEQEVVSFNDKVKKEAALTVSSVQDIETTPRLSASNEMLDTPTSNQVTVESKPLTEITTKDKNISDEVKYEPIDLPELICGDENSLLTNGDLSHKEDPIGSENQKPNRKGSNVAKQERADNGIQNSPTLPSYMAATESAKAKLRAQGSPRFGQDGSERNNQTRRHSLPSSTNSKISSHSPRTHRPVHSGGKGGNRSDRTVSSSSRDGNGKVIQAEWRR 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00757 585 MobiDBLite consensus disorder prediction 422 440 - -
Vian1g00757 585 Pfam IQ calmodulin-binding motif 124 141 IPR000048 GO:0005515
Vian1g00757 585 Pfam IQ calmodulin-binding motif 102 121 IPR000048 GO:0005515
Vian1g00757 585 SMART iq_5 122 143 IPR000048 GO:0005515
Vian1g00757 585 SMART iq_5 99 121 IPR000048 GO:0005515
Vian1g00757 585 MobiDBLite consensus disorder prediction 396 585 - -
Vian1g00757 585 PANTHER IQ-DOMAIN 5-RELATED 1 540 - -
Vian1g00757 585 Gene3D - 97 148 - -
Vian1g00757 585 MobiDBLite consensus disorder prediction 484 500 - -
Vian1g00757 585 MobiDBLite consensus disorder prediction 561 576 - -
Vian1g00757 585 MobiDBLite consensus disorder prediction 249 322 - -
Vian1g00757 585 MobiDBLite consensus disorder prediction 519 546 - -
Vian1g00757 585 Pfam Protein of unknown function (DUF4005) 483 563 IPR025064 -
Vian1g00757 585 MobiDBLite consensus disorder prediction 260 291 - -
Vian1g00757 585 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Vian1g00757 585 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
Vian1g00757 585 MobiDBLite consensus disorder prediction 396 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00757 Vian-Chr1 7883926 7891723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00757 1 585 IQD Protein Family AT1G74690 43.648 4.63e-123 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00757 - - gmx:100794636 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01387 10 23545157 23549375 Vian1g00757 1 7883926 7891723 ECH
Vian1g00757 1 7883926 7891723 Vian1g00757 1 7883926 7891723 ECH