Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00733 ATGTCCAACGGATCCCCTCCTCCGGTGACCGGCGAACACTCCCTGCCACCGGAAGCCGACCCCTCAAACCATGTTTTCGATTCGAAGGAGGAAACTGCGGTGACTCCTCCCCTAACCACAAGGAGTACCCGCCCGTCCCGGGCGTGCACCATGCGCGCCGCCTCTCGCCTCCTTTCCTCGCCGGTGGCTGCTAAGAAGGAGGTTTCTCCGCCACCGACGCCGCAATGCAGCAAGATTGTTACTCCGCTGGTGGAGCCGCCCTCGCCGTCACAGTTGCCACGGTGGCACCTGCGGACGATGTGGGAGTTTGCTTCCGTACTGAATTTCTTGCATCTATTTATGCCTCTTTTGAATATCTCACTGGAATTTTCTGCGGAAGAGTTGGAGACGGCCCTTCTTAACCCCAACGATACTTTGTTTCATGTTCATATGCCTTTGCTAAAGATGATTGTTTCTCATAGGGTTGGCTTCTGTAATGCTGGATTTGATGGGTGGAAGAAGGCCTGTTATTTTTTGCTTGAGGTTGACCGAGATCTGAAGGCACATTCTTCTGCTGAAGCATTGAATGCAACCATTAAGAAATTGAGAGATTGGTGGCATTGGGTTGCTGATGGGGATCTTCCAGTTGTTGCTTCCCATGGGGTGGAGATTGAAGTGTATAATTCACTTGATCCAGGGATCCGTGTTGTCATCTTAAAAGCAATATGCGACATTCGTGTTGAGCAAGAAGACATCCGAAGTTATATTGACAACTCAATTAAACACGGTGTTAGGCTTTCAACATTCCGTAAAGAGCGTATAGGAGGTGATTCGAACGGAATTTCTTATTGGTATGAAGATGATCCCATTATTGGACATAGGCTGTATCGAGAAATAAGGAAAACTGAAGTGATTCAAATGAAGAAAGGGAAAGCAAGAGGTTCCCAGGTTCTTTCTAGCACATCATACCAGTGGGAAGCAGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGAACAGAGACTTCTCTGGGGAAAAAGCTGAAGATAGACATGCTTCCTGAAGTTGAGAAAGCTCATAAGAAAAAGGAGAAAATGCTGAAAAAGCAACACAGACAAGCTCTTCTACTTGATAATTACTTGGTTGTTGATGGGCTTGGTCCAGGGCGTTCTCTTCGTGACAGGAAACCTGTTACCTACACTTTTGATGATTTTGACCGGTCAATCGATGAGGCAATTAAAGTAACCAAGCAGAAACAGCCATCTCCAGAACGTATGCCCAGGAGAGAATCGGTAGCAAAACCTGAAGCTTTGACTAATGGTAAATATGGTCCTCTGCATGCCACACAAGATGCGAATTTTGGTATACCATCTTCAGAATCAGCTGACTCTTATGATGACAAGGAAGACCATGAAAATGACAACTTGGATCGAAGCAATCGTCAAAGACGGAGACCTAATCGATATTCAGAAAGGGAGTTTGTTGGAGCAGTATCATACAATGAGGCAGACTTCGATAGTGATGATGATATTGTTGGCGAAGCTGTATATGATGAAGAATATCTAGAGAAACGCAAGCATAAAAGGAAGTCTTCCAGTAGCTCTGAAGGAGAAGAAGAACATGAGTGGGACGAATACAATGTTGAAGATGACGAAGAAGAAGAAGATGATGATGATGATGATGATTCCTTGAGCATGAGTGAGGATAGTCACAAACCCCGCAAGGTCAAACAGGTGCCAGGCCGTACTAGGAGAGAAACCAAACTGAGATCTGTGGGTGAGATTCAATCAAGTCTAAGACGCAGTAAAAGGGCAACTAGAAATTCTATAAATTACCGTCAATATGAGGCCTCAGAATCAGAAACCGAGTTTATCAAATCTGACAAGTCTGATACATCAGCTGATCACTCAGAACCCAGTGAGAATGGTGAATACATGATGGAAAGTGAAGATTCAGGTGGCAGTGATGATGAAGAACAAGAAACGAAAGTAGATGAGCCTATTACATATCCTGCAATAGAAGAGAATGAACAAAACCAAGCTCCTGAAAAATTAAGTAGTCCTGGTCAGGAGGATCCTGGTCAGGAGGAAGTTGAGAGCACAGGAAAGAGACGCTTCCTTGATTTGAATGAGCTTGCTCCTACCACTGGTTTTGATGATGGTCCAAACACAATAATGAAAGATGAAGACAATGATTACTGA 2208 0.4438 MSNGSPPPVTGEHSLPPEADPSNHVFDSKEETAVTPPLTTRSTRPSRACTMRAASRLLSSPVAAKKEVSPPPTPQCSKIVTPLVEPPSPSQLPRWHLRTMWEFASVLNFLHLFMPLLNISLEFSAEELETALLNPNDTLFHVHMPLLKMIVSHRVGFCNAGFDGWKKACYFLLEVDRDLKAHSSAEALNATIKKLRDWWHWVADGDLPVVASHGVEIEVYNSLDPGIRVVILKAICDIRVEQEDIRSYIDNSIKHGVRLSTFRKERIGGDSNGISYWYEDDPIIGHRLYREIRKTEVIQMKKGKARGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTETSLGKKLKIDMLPEVEKAHKKKEKMLKKQHRQALLLDNYLVVDGLGPGRSLRDRKPVTYTFDDFDRSIDEAIKVTKQKQPSPERMPRRESVAKPEALTNGKYGPLHATQDANFGIPSSESADSYDDKEDHENDNLDRSNRQRRRPNRYSEREFVGAVSYNEADFDSDDDIVGEAVYDEEYLEKRKHKRKSSSSSEGEEEHEWDEYNVEDDEEEEDDDDDDDSLSMSEDSHKPRKVKQVPGRTRRETKLRSVGEIQSSLRRSKRATRNSINYRQYEASESETEFIKSDKSDTSADHSEPSENGEYMMESEDSGGSDDEEQETKVDEPITYPAIEENEQNQAPEKLSSPGQEDPGQEEVESTGKRRFLDLNELAPTTGFDDGPNTIMKDEDNDY 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00733 735 MobiDBLite consensus disorder prediction 416 434 - -
Vian1g00733 735 MobiDBLite consensus disorder prediction 621 645 - -
Vian1g00733 735 MobiDBLite consensus disorder prediction 464 493 - -
Vian1g00733 735 MobiDBLite consensus disorder prediction 594 620 - -
Vian1g00733 735 MobiDBLite consensus disorder prediction 33 49 - -
Vian1g00733 735 MobiDBLite consensus disorder prediction 540 566 - -
Vian1g00733 735 PANTHER REMODELING AND SPACING FACTOR 1 40 729 IPR028938 GO:0006355|GO:0031213
Vian1g00733 735 MobiDBLite consensus disorder prediction 1 82 - -
Vian1g00733 735 MobiDBLite consensus disorder prediction 416 735 - -
Vian1g00733 735 MobiDBLite consensus disorder prediction 519 539 - -
Vian1g00733 735 MobiDBLite consensus disorder prediction 567 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00733 Vian-Chr1 7553705 7561295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00733 - - gmx:100795519 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00733 1 7553705 7561295 Vian1g00733 1 7553705 7561295 ECH
Vian1g00733 1 7553705 7561295 Vian4g00792 4 10404631 10412563 PCT