Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00719 ATGGCCATCACCGGTGAGATTTTCCGGCAAAACTTAACGGAATTGCTCGAGGAGTCTCCTTCTGGTTCGCCAGAGCTTCACGTTCTTGCCGTTGATGACAGCCTCGTTGATCGCAATGTCATCGAACGCTTGCTCAAGGTTTCTTCCTGCAAAGTGACGATTGTGGAGAGTGGAACGCGTGCTCTTCAGTATCTGGGCTTGGAAGGAGAGACCGGTTCTCTCGGGTTGGATAGTGCGAAGGTTAATCTCATAATGACGGATTACTCCATGCCGGGGATGACAGGATACGAATTACTCAAGAAAATCAAGCAGGAGTCTTCCGTGTTTAGAGAGATTCCAGTGGTTATCATGTCGTCGGAGAATGCATTGACTCGAATTGATAGGTGCCTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAACCTGTAAAATTGTCAGATGTAAGACGCTTGAAAGATTTCATCATGAAAGGGAAAGTGAAGGATGTTGAAAAAAAATCTCTCAAAAGAATGAGGTCAACTGATTGCAGTCCACCACTGTCTGCAACATACTCACCCATCTCTCTTCCATGCGATCCGTCACCATTATCCTCAAAGAAGGCTAGATTGTGA 609 0.4631 MAITGEIFRQNLTELLEESPSGSPELHVLAVDDSLVDRNVIERLLKVSSCKVTIVESGTRALQYLGLEGETGSLGLDSAKVNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENALTRIDRCLEEGAEEFLLKPVKLSDVRRLKDFIMKGKVKDVEKKSLKRMRSTDCSPPLSATYSPISLPCDPSPLSSKKARL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00719 202 Gene3D - 26 177 - -
Vian1g00719 202 CDD REC_typeA_ARR 28 150 - -
Vian1g00719 202 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
Vian1g00719 202 SMART REC_2 26 151 IPR001789 GO:0000160
Vian1g00719 202 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 164 IPR045279 GO:0009736
Vian1g00719 202 SUPERFAMILY CheY-like 25 151 IPR011006 -
Vian1g00719 202 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00719 Vian-Chr1 7352489 7354228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00719 5 158 Response Regulator Gene Family AT3G48100 70.064 6.90e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vian1g00719 Response_reg 1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00719 K14492 - gmx:100527518 323.553