Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00707 ATGGGTAGTCTGGCAAGTCATCTTCCTCTAATTGTTATGGTAGGTCTGCAAGTTCATTATGCAGCACTTGCCATCTTCACAAGAGCAGCCCTGTTAGATGGGTTGAGTACAACAGTCTTTGTAGTGTACAGGCAAGGCATAGCAACCTTGGCTTTGGCCCCTATGTTTTTCTCTTCTAAGAGGAGACAATCGGTAAAAAGTTGTTTGGGATTCAGGAGCGTCTTTTTGATGTTCGTCACCGCTCTTGTTGGAGTCACAGCAAATCAGAATGCGTATTTCAGAGGTTTATATTATTCATCTTCTACTGCAGCTACAGCAATGAGTAATCTGATACCTGCTTTAACGTTTGTAATTGCAGCAATTGCGGGATTTGAGAAACTTGAACTACGAAGCTTGAGAAGCATGGCGAAGATATTAGGGACACTTTGCTGTGTTAGTGGCGCCTTAACCATGGCCTTGGTCAAAGGACATAAACTCTTACACACAGAGTTCCTTCCTTCTATACATCTCACTGGCAGTAGTGAAGGTGACGATTGGCTGCTGGGTTGTCTATTGCTTTTAGCAAGCAGTGTTTTCTGGTCTTGTTGGATGATCCTGCAGGTACCAATCTCTTCGTCCTGCCCAGACCATTTATTATCAACCTTTTGGATGTGTCTCTTTTCAACAGTACAGTCAGCCTTATTTGCCCTACTCTCAGAGCCGGATCTTGAAGCATGGATTTTGGATTCACCTTTACAGATTTCATGTTCTTTATACGCAGGACTCGGAATAGCGGTTAGTTTCTTTATTCAATCCTGGTGCATCTCAGAAAGAGGTCCTCTATACTGTGCAATGTTCAACCCTTTAGCAACAGTAATCACTGCTTTCATAAGTGCAACATTCTTACAAGAAGAATTATACATCGGAAGTTTGATAGGGGCTGTTGGAGTTATTGCTGGTTTGTATATTGTGCTTTGGGGTAAAGCCAAAGAGTTTGCTGAGATTAAACCAGCGGCACCACAATCAAACTTGCAAGATGATGAGATAAGTAGTAGGATAGATTTGGAACAACCCCTTCTATCAGATAAATCTGAACATGTAACAGAGACAGATAGCAAGGTGTAG 1104 0.4221 MGSLASHLPLIVMVGLQVHYAALAIFTRAALLDGLSTTVFVVYRQGIATLALAPMFFSSKRRQSVKSCLGFRSVFLMFVTALVGVTANQNAYFRGLYYSSSTAATAMSNLIPALTFVIAAIAGFEKLELRSLRSMAKILGTLCCVSGALTMALVKGHKLLHTEFLPSIHLTGSSEGDDWLLGCLLLLASSVFWSCWMILQVPISSSCPDHLLSTFWMCLFSTVQSALFALLSEPDLEAWILDSPLQISCSLYAGLGIAVSFFIQSWCISERGPLYCAMFNPLATVITAFISATFLQEELYIGSLIGAVGVIAGLYIVLWGKAKEFAEIKPAAPQSNLQDDEISSRIDLEQPLLSDKSEHVTETDSKV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00707 367 Pfam EamA-like transporter family 181 318 IPR000620 GO:0016020
Vian1g00707 367 Pfam EamA-like transporter family 10 137 IPR000620 GO:0016020
Vian1g00707 367 PANTHER WAT1-RELATED PROTEIN 8 325 IPR030184 GO:0016020|GO:0022857
Vian1g00707 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Vian1g00707 367 MobiDBLite consensus disorder prediction 348 367 - -
Vian1g00707 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 216 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00707 Vian-Chr1 7211473 7213562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00707 4 362 Nodulin-like Gene Family AT4G28040 44.722 6.47e-108 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00707 - - gmx:100816384 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00707 1 7211473 7213562 Vian1g00707 1 7211473 7213562 ECH
Vian10g01148 10 18739817 18741203 Vian1g00707 1 7211473 7213562 ECH
Vian4g01555 4 30843687 30847026 Vian1g00707 1 7211473 7213562 ECH