Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00681 ATGGGATCCTCATTCAGTTGCTGTGGCTCAGAGAAGGTCGAAGAAGTGCCAACATCATTTGGCGTGGTTAACAATTCATGGAGAATATTCACGTACAAGGAGCTGCATGCGGCTACCAACGGATTCAGTGATGATAACAAGCTTGGGGAAGGTGGTTTTGGAAGCGTGTACTGGGGAAGAACCAGTGACGGTCTTCAGATAGCGGTAAAGAAACTGAAAGCAATGAACTCGAAGGCAGAGATGGAATTTGCTGTAGAAGTTGAAGTTCTTGGAAGGGTTAGGCACAAAAACTTGCTGGGTCTCAGGGGCTATTGTGTTGGGGATGATCAACGCCTCATCGTTTACGATTACATGCCAAATCTCAGCCTCATATCTCATCTCCATGGCCAGTTTGCTGTTGAAGTGCAACTGAACTGGCAAAGGAGAATGAACATTGCAATAGGCTCTGCAGAAGGGCTTCTGTACTTGCACAGTGAGCTCCCTGGTGGGCTTAAGAGAACAATAACTGAGTGGGCCGAGCCTCTAATAAGCAAAGGAAAGTACAGGGAGCTGGTTGATCCAAAACTGAGGGGGAACTTTGATGAAAACGAAGTGAAACAAGCAATCAATGTGGCTGCTCTTTGCGTGCAGAATGAGCCTGAAAAACGACCCAACATGAAGCGTGTTGTTAACCTTCTTAAAGGGCAAGAATCTGAAGAGAAGAAAGTGAGTGTGACGAGGATCGACAGTATCAAGTACACTGAAGAATTATTGGCACTTGATGAGCCCAGTGATGAAGAACTTGATGATGCAACTGCTAGTTATGGTGTTTTCAGTGCCATTGAAGTCCAAAACATGAAGGATCCATATAACCGTGGCAACTACAAGAAAATCGGTTAA 879 0.4528 MGSSFSCCGSEKVEEVPTSFGVVNNSWRIFTYKELHAATNGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSLISHLHGQFAVEVQLNWQRRMNIAIGSAEGLLYLHSELPGGLKRTITEWAEPLISKGKYRELVDPKLRGNFDENEVKQAINVAALCVQNEPEKRPNMKRVVNLLKGQESEEKKVSVTRIDSIKYTEELLALDEPSDEELDDATASYGVFSAIEVQNMKDPYNRGNYKKIG 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00681 292 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Vian1g00681 292 Pfam Protein tyrosine and serine/threonine kinase 45 158 IPR001245 GO:0004672|GO:0006468
Vian1g00681 292 FunFam PTI1-like tyrosine-protein kinase At3g15890 14 117 - -
Vian1g00681 292 ProSiteProfiles Protein kinase domain profile. 42 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g00681 292 PANTHER OS01G0253100 PROTEIN 165 233 - -
Vian1g00681 292 Gene3D Transferase(Phosphotransferase) domain 1 159 250 - -
Vian1g00681 292 Gene3D Phosphorylase Kinase; domain 1 14 117 - -
Vian1g00681 292 SUPERFAMILY Protein kinase-like (PK-like) 30 227 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00681 Vian-Chr1 6806766 6808210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00681 167 261 Trihelix Transcription Factor Family AT1G70460 33.036 1.91e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Vian1g00681 PK_Tyr_Ser-Thr 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00681 - - gsj:114393039 315.849