Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian1g00680 | ATGAAAATCATTAAAAGAACAAACCAAATTCATGCTTTTTTTTTGTTATTTCTTAGAAATGGGAGTTCTAAAGGAATTGCCAGGTATTGCTTTGAGCATGCACATGAAGGGTGCACAATGGTCTCAGTCGGAAGACGTGGTAAGGCAGATCAAAGTGTCGAACAAAACTCAACTCATTGTCAAGGTAATTCAATTCTCAGATATAATTTAACAAAATACAAATTACAATGGATGACAAGTCTCTTAAATATGGTAACTTGTATCTTTTCACTAGTAGATAACAGACAACCAAATTCAAGACGGTTTAAGAAGGAAAAGCAATGTGATAAGGGTGCCTCCCCTGTTCTGGAGGATTATTTATCAGGAATCAAGGCTCAGAACCGCTCACCAAGAACAGTACTAAATGGTCTAGAGGGACAATCAAACAGCACAGAAGATGATACCTTTAGCACTAGGGTCTCAAGCACCACTTATACCCCATCCTTGGATTCTAAGATTAAGAGCCGATCCAAGATTAAACCACAGTTCTCATTTAGGTTCATAGTCTCATTCCTTGCTTCACCATTTAGAAGGAAAAACTTTAATATTTATAGAAGTGAAAAGCGTCAGCCTTTGTTGAAGTGCTTCAGCTATGAACAAATATCCAATGCTACCAACGACTTCCACCAAGATAATTTGGTTGGACGAGGTGGGTATTCGGAAGTATACAAAGGTGATCTTTCAGATGGACGAACCATTGCTGTGAAGAGGTTGGCCAAGGACAACAAGGATCCTAACAAGGAAAAAGAGTTCCTTATGGAATTGGGTGTTATTGGACATGTCTGTCATCCAAATACCGCAACTTTAGTGGGCTGCTGCATTGAAAATGGGCTATATCTGATTTTCAATTACTCTCAAAATGGAAATTTAGCAACTTCATTGCATGGCAAAGGAGGAGATTCACTTGACTGGCCAATCAGGTACAAAATTGCCATTGGTGTTGCAAGGGGTCTCCATTATCTTCATAAATGTTGCAAACACCGGATAATTCACCGTGACATTAAAGCCTCTAATGTTCTTCTTGGTCCTGACTATGAACCACAGATTGCTGATTTTGGGCTTGCAAAGTGGCTTCCTAACAAGTGGACTCACCATGCTGTGATCCCCGTAGAGGGCACATTTGGATACTTAGCGCCAGAGTACTTTATGCATGGAATCGTGGATGAGAAAACAGATGTTTTTGCATTTGGAATTCTACTTTTGGAGATTGTAACTGGACGGAGACCTGTTGATTCATCAAAACAGAACCTTCTCTTATGGGCAAAGCCTCTGATGGAATCAGGGAACATTGTTGATCTTGCTGATCCAAGAATGGAAGGTAAATATGATGGAGAACAACTGTACAGGGTAGTGCTGGCGGCTTCATACTGTGTGAGACAAACTGCCACGTGGCGTCCCCCAATGAGTGAGGTGCTGGAGCTGTTAACCAGTGGAGAAGACAGTGAGGTTGGAAAAAGCTGGAGGATCCCAAAGTTCACCTCTGATGAATTGGATGATTACTCTATGGTTTTCGGATATGATGTACCCTCAGACCTATCTTTGGAGGATTATTTGTGA | 1596 | 0.4091 | MKIIKRTNQIHAFFLLFLRNGSSKGIARYCFEHAHEGCTMVSVGRRGKADQSVEQNSTHCQGNSILRYNLTKYKLQWMTSLLNMVTCIFSLVDNRQPNSRRFKKEKQCDKGASPVLEDYLSGIKAQNRSPRTVLNGLEGQSNSTEDDTFSTRVSSTTYTPSLDSKIKSRSKIKPQFSFRFIVSFLASPFRRKNFNIYRSEKRQPLLKCFSYEQISNATNDFHQDNLVGRGGYSEVYKGDLSDGRTIAVKRLAKDNKDPNKEKEFLMELGVIGHVCHPNTATLVGCCIENGLYLIFNYSQNGNLATSLHGKGGDSLDWPIRYKIAIGVARGLHYLHKCCKHRIIHRDIKASNVLLGPDYEPQIADFGLAKWLPNKWTHHAVIPVEGTFGYLAPEYFMHGIVDEKTDVFAFGILLLEIVTGRRPVDSSKQNLLLWAKPLMESGNIVDLADPRMEGKYDGEQLYRVVLAASYCVRQTATWRPPMSEVLELLTSGEDSEVGKSWRIPKFTSDELDDYSMVFGYDVPSDLSLEDYL | 531 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian1g00680 | 531 | PANTHER | OS08G0249100 PROTEIN | 68 | 501 | IPR046958 | - | |
Vian1g00680 | 531 | ProSitePatterns | Protein kinases ATP-binding region signature. | 227 | 249 | IPR017441 | GO:0005524 | |
Vian1g00680 | 531 | MobiDBLite | consensus disorder prediction | 133 | 154 | - | - | |
Vian1g00680 | 531 | FunFam | Probable receptor-like serine/threonine-protein kinase At5g57670 | 298 | 502 | - | - | |
Vian1g00680 | 531 | SUPERFAMILY | Protein kinase-like (PK-like) | 195 | 488 | IPR011009 | - | |
Vian1g00680 | 531 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 342 | 354 | IPR008271 | GO:0004672|GO:0006468 | |
Vian1g00680 | 531 | Pfam | Protein kinase domain | 221 | 430 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian1g00680 | 531 | Gene3D | Phosphorylase Kinase; domain 1 | 185 | 297 | - | - | |
Vian1g00680 | 531 | ProSiteProfiles | Protein kinase domain profile. | 221 | 496 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian1g00680 | 531 | FunFam | Putative receptor-like serine/threonine-protein kinase | 188 | 297 | - | - | |
Vian1g00680 | 531 | Gene3D | Transferase(Phosphotransferase) domain 1 | 299 | 501 | - | - | |
Vian1g00680 | 531 | SMART | serkin_6 | 221 | 488 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian1g00680 | Vian-Chr1 | 6800107 | 6802311 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian1g00680 | 209 | 527 | Trihelix Transcription Factor Family | AT1G70460 | 40.356 | 1.67e-74 | 248 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VI | Vian1g00680 | PK_Tyr_Ser-Thr | 3.9e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian1g00680 | - | - | gmx:100782832 | 875.93 |