Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00670 ATGGACGGAATGCAAGAAAGAAACTCACAGCTTGGAACTGATATTGGGTCCTCCTTATCAAAGCTAATATTAACCAGTGGCTCAAACACCCTGGACTCAATCTTCTCAGATTGTCCCCCAACAAACGCCGCCAGTAGCAACTCCGTGTTGGACTATTTAGAACCCTTTGGATCTTCCGGGTTTGAGCCTTTGGGCTCTTCCGTCTACCTTCGCCAGAAGGACATCCTCCAAAAGTTCTACCAAGAAAGCCGGGGGAACGGGAACGGCAACGGCAACGGATCTCTTCTTCCCACTTCCTTGGCAAACCCGTCTATAAATTCTCTTTACACTGCTTCGTTGACTTCTTCTTTGACCAACCCTTCCAAGAAAAAGCTCTACAGGGGAGTGAGACAGAGACACTGGGGCAAATGGGTCGCCGAAATTAGACTTCCCCAATTTGAAGGACCCGACCAAGCTGGGGTTCGGAGATTCCGCCAGATTGAACGCCTTGAAGAGCTCCGTCGACGCCAAAATCCAGGCCATATGTCAGAAGAAAAGAAAGAATAA 546 0.489 MDGMQERNSQLGTDIGSSLSKLILTSGSNTLDSIFSDCPPTNAASSNSVLDYLEPFGSSGFEPLGSSVYLRQKDILQKFYQESRGNGNGNGNGSLLPTSLANPSINSLYTASLTSSLTNPSKKKLYRGVRQRHWGKWVAEIRLPQFEGPDQAGVRRFRQIERLEELRRRQNPGHMSEEKKE 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00670 181 Gene3D AP2/ERF domain 125 171 IPR036955 GO:0003700|GO:0006355
Vian1g00670 181 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 28 145 - -
Vian1g00670 181 SUPERFAMILY DNA-binding domain 125 151 IPR016177 GO:0003677
Vian1g00670 181 ProSiteProfiles AP2/ERF domain profile. 125 181 IPR001471 GO:0003700|GO:0006355
Vian1g00670 181 SMART rav1_2 125 173 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00670 Vian-Chr1 6652623 6657645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00670 2 145 AP2-EREBP Transcription Factor Family AT1G64380 39.634 1.12e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00670 - - gmx:100785364 193.741