Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00664 ATGCAGAAACCATCTACCGACGCAATTAGTATGGGAAAAAGGAGCCTGGAGGGTGGAGAAGATGATCAGCCTGAACGAAAGAGGCCTGCTCTCGCCAGTGTAATTGTTGAAGCTCTTAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAGCCTATTCTACGTAGAGTTGTGAGTGAAGAGGTGGAGCGTGCTTTGGCAAAGTTAGGTCCTGCAAGAATTGGTGGAAGGTCTCCACCTAAAATGATTGAAGGCCCTGAAGGTAGAAACTTGCAGCTGCAATTTAAGTCCCGGCTGTCTCTTCCCCTCTTCACAGGAGGAAAAGTAGAAGGCGAGCGGGGGGCTCCAATACATGTTGTTCTGATTGATGCCAACAGTGGAAGCGTTGTAACATCTGGACCTGAATCCTCTGTTAAGCTTGATGTTGTTGTCCTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACCCAAGAGCATTTTGAAAGCCATGTGGTAAAAGAACGTGAAGGAAAGAGACCTTTATTAACTGGGGACCTGCAAGTAACACTCAAGGAAGGAGTTGGAACATTAGGGGAACTGACCTTTACTGATAATTCAAGCTGGATACGGAGCCGCAAATTCCGGCTTGGCCTGAAGGTTGCCTCAGGCTTTTGTGAGTCCGTACGCATTCGTGAAGCTAAGACAGTGGCTTTTAATGTTAAAGATCATAGAGGAGAATTATATAAGAAGCACTACCCTCCTGCATTGACTGATGAAGTGTGGAGATTGGAGAAGATAGGCAAGGATGGATCATTTCACAAGAAGCTGAATAATGCAGGAATAGTCACAGTTGAAGACTTTCTTCGGCTCGTGGTTAAAGATCAACAGAAATTGCGGAATATCCTTGGAAGTGGTATGTCGAACAAGATGTGGGAGGCTCTTTTAGAGCATGCAAAAACATGTGTTCTAAGTGGGAAGCTCCATGTTTATTATCCAGAAGATGCAAGAAATGTTGGTGTTATTTTTAACAATATCTATGAGCTGCGTGGTCTTATATCAGGAGAACAATTCTTTTCTGCGGATTCTCTCACTGATACCCAGAAGGTTTATGTAGATTCGTTGGTGAAGAAAGCATACGAAAATTGGGAACAGGTTGTAGATTATGATGGCAAATCACTTGTTAATGGCAACCAAAATACCAGTTCTATTGCATCTGAAAATGAACTTCGTGTTGAGTCAATTGATTATGGTTCTGGTTTAGATCATCAGCTGCAACTGCCGGGACTTCCAGTGTCCGTTCCTTCTGAACATCAAATGAATTCTGGGATGTCAGTTGGGGGTTATAACGATAATGAGGTAACACGATATCCAACCCAGTCATTGATTTCAAACTCAAGCTCCCGGAGTCAGTTCGATAGCTCATTATATCTGTCTAATGACCAATTAATTACCAATACTCACCACTCCCCAAACGCTAGAAACGATCATGGGACAGTTGGGTTAGCTCTAGGACCTCCTCAATCATCGACGTCAGGGTTCCATGCTGGTAGCTCTTCTATTCAGCCATCTACTCTAAACCCTTTTGATGATTGGTCACACAACAGGGACAAGGGGGTTGATGAATTCTTTTCAGAAGAAGAAATCCGCCTCAGAAGTCACGAAATGTTAGAGAATGAAGATATGCAGCACTTGCTTCGGCTCTTCAGCATGGGAGGCCATGGGTCCATGAGTGCGGAGGATGGCTTTTCATTCCCAACATATATGCCATCTCCCAATATACCAAACTATGATGAGGACCGTTCTCGCCCAGGCAGAGCTGTTGTGGGATGGTTGAAGATCAAGGCAGCAATGAGGTGGGGGTTCTTTATCAGGAAGATAGCAGCTGAGAAACGGGCACAGATAGAGGAGTTAGATGAATAG 1908 0.4413 MQKPSTDAISMGKRSLEGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARIGGRSPPKMIEGPEGRNLQLQFKSRLSLPLFTGGKVEGERGAPIHVVLIDANSGSVVTSGPESSVKLDVVVLEGDFNNEDDEDWTQEHFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGFCESVRIREAKTVAFNVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKKLNNAGIVTVEDFLRLVVKDQQKLRNILGSGMSNKMWEALLEHAKTCVLSGKLHVYYPEDARNVGVIFNNIYELRGLISGEQFFSADSLTDTQKVYVDSLVKKAYENWEQVVDYDGKSLVNGNQNTSSIASENELRVESIDYGSGLDHQLQLPGLPVSVPSEHQMNSGMSVGGYNDNEVTRYPTQSLISNSSSRSQFDSSLYLSNDQLITNTHHSPNARNDHGTVGLALGPPQSSTSGFHAGSSSIQPSTLNPFDDWSHNRDKGVDEFFSEEEIRLRSHEMLENEDMQHLLRLFSMGGHGSMSAEDGFSFPTYMPSPNIPNYDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDE 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00664 635 PANTHER OS02G0177800 PROTEIN 11 557 IPR012416 GO:0005516
Vian1g00664 635 Pfam Calmodulin binding protein central domain 252 317 IPR046830 -
Vian1g00664 635 MobiDBLite consensus disorder prediction 14 28 - -
Vian1g00664 635 MobiDBLite consensus disorder prediction 1 28 - -
Vian1g00664 635 Pfam Calmodulin binding protein C-terminal domain 322 384 IPR046829 -
Vian1g00664 635 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00664 Vian-Chr1 6595864 6601892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00664 1 630 Calmodulin-binding Proteins AT5G57580 66.719 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00664 - - gmx:100790087 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00664 1 6595864 6601892 Vian1g00664 1 6595864 6601892 ECH