Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00655 ATGGAACAACAACAATCTACACAACACCACAACCATGACTTCATCTTCCGTTCCAAACTCCCCGACATTTACATTCCCACGCACCTCCCTCTCCACACTTACATCTTCCAAAACATCTCCCAATTCAACCACCGACCCTGTCTCATCAACGCCGCCACCGGAGAATGCTTCACCTATGCCCACGTCCAACTCACCGCCCGCAGAGTCGCCGCCGGCCTCAACAAACTCGGCATCCAACACGGCGACGTCATCCTCCTTCTGCTCCAGAACTGCCCCCAGTTCGTCTTCGCATTCCTGGGCTCCTCCTTCTGCGGCGCCACCGTCACCACCGCTAACCCCTTCTACACTCCGGCGGAGGTGGCCAAGCAAGCCGCGGCCTCCAACGCCAAACTCATCATAACACAGGCGTCCTACGTGGACAAAGTGAAGGATTTCGCGAGGGAAAACGACGTCAGAGTGATGTGCGTTGACGGGGCGCCGCCGCTGGAAGGTTACCTTCAGTTCTCGGAGTTAACGAAGGCAAACGAGAATGACATTCCCGGCGTTAAAATATCCCCAGATGACGTGGTTGCGCTGCCGTATTCTTCTGGAACGACGGGGCTTCCGAAGGGAGTGATGCTAACGCACAAAGGGCTGATTACGAGCGTGGCGCAACAGGTGGACGGAGAGAACCCTAATCTGTACATACGCAGCGAGGACGTGGTGTTGTGCGTGCTTCCACTTTTCCATATCTATTCCCTCAACACTGTTTTGCTTTGTTCCCTTCGAGTTGGGGCTGCAGTTTTGATAATGCCCAAATTCGATATAGTTAAGTTGATGGAGCTGGTGGAAAAACACAAGGTGAGCGTGGCGCCGTTTGTGCCACCCATCATTTTGGCCATTGCCAAGAGTCAAGATTTGCAGCGATACGACCTGTCGTCGATTCGAGCGATTATGTCTGGCGCCGCTCCTGTGGGAAAGGAACTTGAGAATTCTGTCAGGGCCAAACTTCCCAACGCCATTCTTGGACAGGGTTATGGGATGACAGAAGCAGGACCAGTGCTTTCAATGTGCTTAGCGTTTGCGAAGGAAGCAGGGCATGTGAAATCAGGTTCGTGCGGGACCGTTGTAAGAAATGCAGAGATGAAGATCGTTGACCCTCTCACTGGTGCTTCGCTTCACACAAATCAAGCTGGTGAGATTTGCATCAGAGGCAACCAGATCATGAAAGGTTACCTAAACGATGAAGAAGCCACAAAAATAACTATAGACGAAGAAGGATGGTTGCATACGGGTGATATTGGATACATCGACGATGATGACCAGATTTTCATCGTTGATCGGTTGAAGGAGTTGATCAAATACAAAGGATTTCAGGTTGCTCCTGCTGAGCTCGAAGCCATGCTAATTGTGCACCCAAAGATTTCTGATGCTGCCGTTGTCTCCATGAAGGATGAAGCTGCAGGAGAGGTTCCGGTTGCGTTTGTTGTACTATCAAATGGTTCTAAGATCTCTGAGGAAGAAATCAAGCAGTACATCTCAAAGCAGGTTGTGTTTTACAAAAGAATCAGTAGAGTTTTCTTTGTGAGTTCAATTCCGAAGGCAGCCTCTGGAAAGATCTTGCGAAGAGAACTGAGGGCAAGGCTTGCAAATGGTCTTCTTTCATTGTGA 1650 0.5036 MEQQQSTQHHNHDFIFRSKLPDIYIPTHLPLHTYIFQNISQFNHRPCLINAATGECFTYAHVQLTARRVAAGLNKLGIQHGDVILLLLQNCPQFVFAFLGSSFCGATVTTANPFYTPAEVAKQAAASNAKLIITQASYVDKVKDFARENDVRVMCVDGAPPLEGYLQFSELTKANENDIPGVKISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGENPNLYIRSEDVVLCVLPLFHIYSLNTVLLCSLRVGAAVLIMPKFDIVKLMELVEKHKVSVAPFVPPIILAIAKSQDLQRYDLSSIRAIMSGAAPVGKELENSVRAKLPNAILGQGYGMTEAGPVLSMCLAFAKEAGHVKSGSCGTVVRNAEMKIVDPLTGASLHTNQAGEICIRGNQIMKGYLNDEEATKITIDEEGWLHTGDIGYIDDDDQIFIVDRLKELIKYKGFQVAPAELEAMLIVHPKISDAAVVSMKDEAAGEVPVAFVVLSNGSKISEEEIKQYISKQVVFYKRISRVFFVSSIPKAASGKILRRELRARLANGLLSL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00655 549 ProSitePatterns Putative AMP-binding domain signature. 192 203 IPR020845 -
Vian1g00655 549 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 443 - -
Vian1g00655 549 Gene3D - 443 545 IPR045851 -
Vian1g00655 549 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 540 - -
Vian1g00655 549 FunFam 4-coumarate--CoA ligase 2 444 545 - -
Vian1g00655 549 Gene3D - 6 442 IPR042099 -
Vian1g00655 549 Pfam AMP-binding enzyme C-terminal domain 457 532 IPR025110 -
Vian1g00655 549 Pfam AMP-binding enzyme 38 448 IPR000873 -
Vian1g00655 549 SUPERFAMILY Acetyl-CoA synthetase-like 11 545 - -
Vian1g00655 549 CDD 4CL 25 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00655 Vian-Chr1 6498990 6504328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00655 1 510 Monolignol Biosynthesis Gene Families AT1G51680 68.217 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00655 K01904 - gmx:100779668 894.804