Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00626 ATGGAAGGGCAAGTGGCTAAACGCAGACGTGTATACTCTGTGGAGCCAAACCAAATAGTGCAATCTATATTTACTAGGAATTATTTGAACCATTTAGTTCCAGCGTTGGTGAATATAAAGGAGAAGACCTCCGTAGAAGATACCAGCCATTGTGATATTAACCGTGCTGTCAAGTATGAGGTGGACATGGCAATGGTGTTATCAGCACAAGGTTTTGCATGGAGTAACGGCCTCAAAGTCAAGCTTCGAAACGATCGTGGTCGTGTCAATGCAGCTAAAAGCTCTACGTTTCTTGAAAATGCGGTTGGTGAAGGTTCATCAAGTGCTTGTGAGAAAAATGAGGTTGTCCCAATGGAATTCTCTTCAAACCCTAGCTCGAAGCCTAAGGCTGAGGCTTTAGGGAGCAAGTCTAAGTGCAAGGAGGTGTCAGAAATGAAAAGGGATTTGGCGAGAGAAGATGATAATGCAGATGAGGACATCGACGAGCAGTGGAAGAGGCTGAGAAGGTTGATACCTGGAGGAGAAGAGATGTGTGATGAACAAATGACTAAAGAGCTTGAGAGTTACATTAGCTGTTTGCAAATGCAGGTGAACGCTCTTCAGTTTCTGCTGCCACAGACGCGTTAA 627 0.445 MEGQVAKRRRVYSVEPNQIVQSIFTRNYLNHLVPALVNIKEKTSVEDTSHCDINRAVKYEVDMAMVLSAQGFAWSNGLKVKLRNDRGRVNAAKSSTFLENAVGEGSSSACEKNEVVPMEFSSNPSSKPKAEALGSKSKCKEVSEMKRDLAREDDNADEDIDEQWKRLRRLIPGGEEMCDEQMTKELESYISCLQMQVNALQFLLPQTR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00626 208 CDD bHLH_AtIBH1_like 151 204 IPR044549 GO:0006355
Vian1g00626 208 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 203 IPR044660 GO:0006355
Vian1g00626 208 MobiDBLite consensus disorder prediction 119 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00626 Vian-Chr1 6134617 6135243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00626 1 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 47.059 7.15e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00626 - - gmx:100775329 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00626 1 6134617 6135243 Vian4g00243 4 2535981 2536565 PCT