Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00623 ATGTTGAGTATATATAAGTGGATACACAACATAGATGTTGGAACCAAATCGAAGAAGCAAAATACAAGAGTCAGTAACATGGAAACTCCTAACTTTGTCTTCTTCTCCTTGCTGCTTCTCTTGACTAGTACAACTATAAGCTCAGCTGAACTCACTCCTGGCTTCTACAACAATGTATGCCCCAATGTGGAGCAGTTGGTACGCTCTGCTGTTGCACTCAAGTTCCAGCAGACTTTTGTCACTGCTCCTGCCACTCTTCGACTCTACTTCCATGATTGCTTTGTGAGGGGTTGTGATGCTTCAATTCTGCTCGCAAATAGTAACTCAGAAAAGGATCATCCTGATGACATATCTCTTGCTGGGGATGGCTTTGACACAGTGATTAAAGCCAAGGAAGCTGTTGATAGTGACCCCAAGTGCCGGAACAAAGTCTCTTGTGCTGATATACTCGCTCTGGCTACTAGGGATGTTGTAAATTTGGCTGGGGGACCATTTTACGATGTTGAATTGGGAAGGCGTGATGGTAGAATATCTACTATTGCAAGTGTTCAACGCCATCTTCCTCACCCTGATTTCAATTTGGATCAGCTCAATTCCATGTTCAACTTCAATGGCCTATCTCAGACAGATATGATTGCATTATCAGGTGCACACACAATTGGGTTCTCTCACTGCAACCGCTTCTCGAAACGAATCTACAACTTCAGCCCCAAAAACAGAATCGATCCAACGCTGGATTTACAATATGCTTTTCAGCTTAGACAGATGTGCCCTTTAAAGGTTGATCCTAGAATTGCCATAAACATGGACCCTGTGACGCCTCAGAAGTTTGACAACCAATACTTCAAGAATCTGCAGAATGGACAGGGTCTCTTCACCTCTGATCAGGTGCTGTTTACAGATGAAAGGTCAAAGGCTACAGTCAACTCGTTTGCATCAGATGAAAGAACTTTTCAGAAAGCTTTTATTGATGCAATTACCAAGTTGGGAAGGGTTGGTGTTAAAACGGGAAAGCAAGGTGAAATTAGGTTTGATTGCACCAGGTCAAACTAG 1053 0.4302 MLSIYKWIHNIDVGTKSKKQNTRVSNMETPNFVFFSLLLLLTSTTISSAELTPGFYNNVCPNVEQLVRSAVALKFQQTFVTAPATLRLYFHDCFVRGCDASILLANSNSEKDHPDDISLAGDGFDTVIKAKEAVDSDPKCRNKVSCADILALATRDVVNLAGGPFYDVELGRRDGRISTIASVQRHLPHPDFNLDQLNSMFNFNGLSQTDMIALSGAHTIGFSHCNRFSKRIYNFSPKNRIDPTLDLQYAFQLRQMCPLKVDPRIAINMDPVTPQKFDNQYFKNLQNGQGLFTSDQVLFTDERSKATVNSFASDERTFQKAFIDAITKLGRVGVKTGKQGEIRFDCTRSN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00623 350 ProSitePatterns Peroxidases active site signature. 82 93 IPR019794 GO:0004601
Vian1g00623 350 Gene3D - 54 350 - -
Vian1g00623 350 FunFam Peroxidase 54 197 - -
Vian1g00623 350 PRINTS Haem peroxidase superfamily signature 144 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 PRINTS Haem peroxidase superfamily signature 82 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 PRINTS Haem peroxidase superfamily signature 162 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 PRINTS Haem peroxidase superfamily signature 270 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 ProSiteProfiles Plant heme peroxidase family profile. 50 350 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 Gene3D Peroxidase, domain 2 188 329 - -
Vian1g00623 350 Pfam Peroxidase 70 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 FunFam Peroxidase 188 329 - -
Vian1g00623 350 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 PRINTS Plant peroxidase signature 324 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 PRINTS Plant peroxidase signature 143 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 PRINTS Plant peroxidase signature 284 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 PRINTS Plant peroxidase signature 84 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 PRINTS Plant peroxidase signature 60 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 PRINTS Plant peroxidase signature 122 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 PRINTS Plant peroxidase signature 268 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 CDD secretory_peroxidase 50 348 IPR033905 GO:0004601|GO:0042744
Vian1g00623 350 SUPERFAMILY Heme-dependent peroxidases 51 350 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian1g00623 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Vian1g00623 350 PANTHER - 32 350 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00623 Vian-Chr1 6107179 6108723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00623 31 350 Peroxidase AT2G18980 74.688 4.11e-176 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00623 K00430 - gmx:100804620 580.867