Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00581 ATGCACATGATTTCTCTTCTGCATGCAGGAGGTGCAAATGTTCGGCCACTTTCATGGGATACAAGGCTGAAGGTTATGATTGACGCAGCTAGGGGACTGAATCTCCTTCATTCCATGGAAATGAAAATTGTACATAGAGATTTTAAACCCTCAAATATACTACTTGACGAGGCATTTACGGCAAAGTTATCAGACTTTGGGTTAGCCAAATCTTTTTCTTCGCTTGATCAGACTCACGTAACAACACGAGTTATGGGAACAGGAGGCTATGCTGCTCCTGAGTATATAGCAACAGGTCGTTTGAAAGTGAAAAGTGACGTGTATGCATTTGGAATTGTTTTGATGGAGGTGCTGACAGGGAAAAGAATGCAAGATATATGGCGATTGCTGAAGCAAAAGTCCTTGACGGATTGGCTCAAATCAAATATACTAAATAGAGGGAAAATAAGAATGAATATGGATGCAAAGTTGGAAAGAAAGTATCCAACCAACTTAGCTTTAGAGGTAGCTCAACTAGCTCTCAAATGCATCCGAACAGAAGCCAAAGTGAGGCCATCAATGAAAGAAGTTCTTGAAAGATTGGAACAGATTGAAGCAGCTAATGAGAAACCATCTGACAACAGTTATAACAGAAGACGTGTTAATCGTTCCCAGGTAGTTCAACAACGCGATCAGCCAGATGGTGGTCAATTGAATTGA 699 0.4077 MHMISLLHAGGANVRPLSWDTRLKVMIDAARGLNLLHSMEMKIVHRDFKPSNILLDEAFTAKLSDFGLAKSFSSLDQTHVTTRVMGTGGYAAPEYIATGRLKVKSDVYAFGIVLMEVLTGKRMQDIWRLLKQKSLTDWLKSNILNRGKIRMNMDAKLERKYPTNLALEVAQLALKCIRTEAKVRPSMKEVLERLEQIEAANEKPSDNSYNRRRVNRSQVVQQRDQPDGGQLN 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00581 232 MobiDBLite consensus disorder prediction 201 232 - -
Vian1g00581 232 MobiDBLite consensus disorder prediction 211 232 - -
Vian1g00581 232 PANTHER OS01G0588500 PROTEIN-RELATED 13 198 - -
Vian1g00581 232 Pfam Protein kinase domain 24 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g00581 232 Gene3D Transferase(Phosphotransferase) domain 1 2 223 - -
Vian1g00581 232 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 1 208 - -
Vian1g00581 232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Vian1g00581 232 SUPERFAMILY Protein kinase-like (PK-like) 12 209 IPR011009 -
Vian1g00581 232 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00581 Vian-Chr1 5578771 5579680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00581 16 218 Receptor kinase-like Gene Family AT4G02010 44.660 8.75e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vian1g00581 Pkinase 8.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00581 - - gmx:100813304 327.02