Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00571 ATGGCGTATTCGATACCGGAATCTGGCCGAAGCGCCAGAGTTTCAGCGGTCGTGACCTGGGGCCTGTTCCTGCCAAGTGGAAGGGCGAGTGCGTCGCCGGGAAGAGCTTCCCGGCTACCTCATGCAACCGAAAAATCATTAGAGCCAGGAGATGATGGGTTTGGATCCTTCCAAACAGATATGTATCAAGCAGTTGTTGTTGTTGGGGAGATGAGGGGTTTGGATCCTTCCAAACAGCATTCTGCTTCCATACTTCAATTTCAACAACCGCAGAATTTCCCAAACAGGACAACTGCTTTTGTGCAGTATCTTGGGTTCATTCTCGCCGCGTTCGACGCTGCCGTGGCCGACGATGTCGACATGGTGTCGCTTAGGGTCGGAGGAGTGGTGGTGTCGTACCACCTCGACGAGATTGCGATTGGCGCCTTCGGCGCCACCTTGGCTGGCGTTTTTGTTCCTTCTCAGCTGGCAATGGCGGTCCAGGTGCCCTCACAGTGA 498 0.5462 MAYSIPESGRSARVSAVVTWGLFLPSGRASASPGRASRLPHATEKSLEPGDDGFGSFQTDMYQAVVVVGEMRGLDPSKQHSASILQFQQPQNFPNRTTAFVQYLGFILAAFDAAVADDVDMVSLRVGGVVVSYHLDEIAIGAFGATLAGVFVPSQLAMAVQVPSQ 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00571 165 MobiDBLite consensus disorder prediction 28 51 - -
Vian1g00571 165 Gene3D Peptidase S8/S53 domain 106 152 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00571 Vian-Chr1 5473601 5475679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00571 107 152 Subtilisin-like Serine Gene Family AT3G14240 73.913 7.77e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00571 - - gmx:100798719 69.707