Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00502 ATGATCTCCAATAGGGTTATCACAGGGTTTGGGAGGGGAAGCAGTGAGGAGCAAGATGTGAGGTTTACCTATGATGAAATTAGGGTATTGAGGGTTTTGAGTGAGCCAATTTTGGCGCTCTTGGTCCCAATTATTGATTTTGGGACCAAGGGTAAAGGTAGCCTAGGGGTTGAAGGGTTGTTGGTCGTCCGGATCGGAGGGGTCGACGTCGGATCGAATCTCGACGAGGATGCAGTTGGTCTCCTTGATAAGGTTCTGGTTAACGGCGTCGAAATCGGAGGAGCCGAGATTGACGCCGATGGTGCTGCGGAGGACGAGGATGGTCTTCTGGATCTGGCAGCCGCGGGGGATCCTGGTGGCGCGGCCTCGAGCGTTGGAGGTGGGGATTGTGATTTCTTGAATTCCAAGAAGAAGAAAGAAACTTCGCAGCTTTTGACTCTAAAGCCACCTCTCTCTAAACAAGAAACGGTGACTTTCTGCCATCTCAATTTTGGGCGGAAGCAACCTTCGCCGGAAGAATTGTATCTCCATGAAAGCTTGGAGTTTAAGAATTTCATTGCAAGAGAGACCTTTCTTAACGAAGAGTATTGGATAAGTTTTTTTTATTTTTATTTTTTTCTTTCCTTTCTTTTAATCTTTTCTATTTTTGCTTACCAAAAAACTTGCTATTTATTGCTACTAACGCAGATAGCAGCTGCGCTAAGGACAGAACATAGCTGGGAAAATAAATCAGGATTTAACCACTATGAGAAGAGGATAGACACGATTGAGGAATATGATAAGATAAAGAAGCAGTGCAGAGAACCACAACCCGGCCATAGCTCCACATGCATCATCGCGGTGAAGAAGCATGTAAAGAGTGTATCACGAATAGTCCTACTAAGTGTCGTAGGAACGCTTGATTTGAATATCAGATGTTTGCATCTTGGAGAAGGGGTGTATGCTCCTGGTTTTCAAGTCAAGGGAACATCATCAAGCAGACACGGTTATGTTGCAAACTTGGTTGTTGCTAAATCATATCGACGCAAGCGTATTGCAAGCAACATGTTGTCTTTTGCTATGAAATATGCAAAATCTAGAGGTGTGAATAGTTTTTATGCTCATGTAAATAGACACGATGGCCCTGCCTTGGCATTGTTCCAAAAGTTGGGGTTTGAGGTACTTGAAATTGCGAACCCCTTGATGATATTGAGTAACTTGTACTTGCTTGGCTTACAGATGTAA 1224 0.4395 MISNRVITGFGRGSSEEQDVRFTYDEIRVLRVLSEPILALLVPIIDFGTKGKGSLGVEGLLVVRIGGVDVGSNLDEDAVGLLDKVLVNGVEIGGAEIDADGAAEDEDGLLDLAAAGDPGGAASSVGGGDCDFLNSKKKKETSQLLTLKPPLSKQETVTFCHLNFGRKQPSPEELYLHESLEFKNFIARETFLNEEYWISFFYFYFFLSFLLIFSIFAYQKTCYLLLLTQIAAALRTEHSWENKSGFNHYEKRIDTIEEYDKIKKQCREPQPGHSSTCIIAVKKHVKSVSRIVLLSVVGTLDLNIRCLHLGEGVYAPGFQVKGTSSSRHGYVANLVVAKSYRRKRIASNMLSFAMKYAKSRGVNSFYAHVNRHDGPALALFQKLGFEVLEIANPLMILSNLYLLGLQM 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00502 407 Gene3D - 237 399 - -
Vian1g00502 407 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 246 407 IPR000182 GO:0016747
Vian1g00502 407 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 133 198 - -
Vian1g00502 407 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 327 389 IPR016181 -
Vian1g00502 407 CDD NAT_SF 327 368 - -
Vian1g00502 407 Pfam Acetyltransferase (GNAT) family 324 385 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00502 Vian-Chr1 4767733 4770314 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vian1g00502 Acetyltransf_1 4.1e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00502 - - var:108336741 724.161