Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00491 ATGGCGATTTCAGGGTCGGAGACTCAGAGTTCGTCCTCACTGAAAATTGTGTCTCAGGTGGAAGTGGAGTGTGTGAAATGCGACTCGTGCGGGTTCACAGAGGAATGCACGCCTGCGTACATCTCGAGGGTGCGTCAGAGGTACCAGGGTCGGTGGCTCTGTGGGCTGTGCGTGGAGGCTGTGAAACACGAGGTGGTGAGATCAGAAAGTGTCATCACCACCGAAGAAGCCCTGGACCGCCACATCACTTTCTGCAGAGAGTTCCGATCATCCACCGTTCTCAACGAAACTGAGCACCCCATCTTCGCCATGGGACGCCTCCTCCGCCGGAGCCTCGATTCTCCCAAGCCTCTCCGATCGAACTCCACTGGAGCTCTCGGGGTTAAAGCCCTGCAATTGATTCGATCGGAGAGTTGCTTCTCTTCAATCTCCGGCTAA 438 0.5594 MAISGSETQSSSSLKIVSQVEVECVKCDSCGFTEECTPAYISRVRQRYQGRWLCGLCVEAVKHEVVRSESVITTEEALDRHITFCREFRSSTVLNETEHPIFAMGRLLRRSLDSPKPLRSNSTGALGVKALQLIRSESCFSSISG 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00491 145 PANTHER OS01G0745000 PROTEIN 11 144 IPR012876 -
Vian1g00491 145 Pfam Protein of unknown function (DUF1677) 22 110 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00491 Vian-Chr1 4645814 4646251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00491 - - gmx:100797385 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00491 1 4645814 4646251 Vian4g02078 4 37651895 37652338 ECH
Vian1g00491 1 4645814 4646251 Vian7g00492 7 12181483 12218575 ECH
Vian1g00491 1 4645814 4646251 Vian1g00491 1 4645814 4646251 ECH