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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vian1g00476
ATGCAAACGCAACCAATTTCCACTGTCGCCTTCACGCTCTTCCTTCTCTTGTTGTCTCCACCACGCGCCGCCGCGGCAAGGCCACCACCAGATCCACTTCGTACATCATGCGCGCAGGCCAGGTACCCCGCTCTATGCGTGCAAACCCTCTCCAACCTTTCCAACACCGCCGCCAAGCCCCTCGACCTTGCCCAGGCCGCCGTCAGAGCTAGTCTGGCCCGTACGCGCGGTCTCTCCGCCTACCTTTGGGCGCTAAAGGCTGCATCGCAGGGTTTCGAACTGAGGCAGCGAGTTGCGGTGAGTGACTGCGTGAAGCAGATATCCGACTCGGTGAGAGAATTGAGCAAGACGCTGAACGAGTTGCAGCACCTCCGCGACGAAACCTTCCAGTGGCAGATGAGCAACGTGCAGACCTGGACCAGCGCCGCCCTCACCAACGGCGACACTTGCATCTCCGGCTTTAACGCTGTCGCCGCCGCCGCCGCCGGGAATATCAAGTTGGAGCTCAAGCAAAGAGTCACCGACGTTTCCATGTTCACCAGCAACGCGCTTTACCTCATCAGCCGCCTCACTGATAGCGTCACGGGGAAGCCTCGCGCCAATTCCGGGAACTGA
615
0.6033
MQTQPISTVAFTLFLLLLSPPRAAAARPPPDPLRTSCAQARYPALCVQTLSNLSNTAAKPLDLAQAAVRASLARTRGLSAYLWALKAASQGFELRQRVAVSDCVKQISDSVRELSKTLNELQHLRDETFQWQMSNVQTWTSAALTNGDTCISGFNAVAAAAAGNIKLELKQRVTDVSMFTSNALYLISRLTDSVTGKPRANSGN
204
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vian1g00476
204
Coils
Coil
104
127
-
-
Vian1g00476
204
CDD
PMEI-like_3
35
191
-
-
Vian1g00476
204
Gene3D
Invertase/pectin methylesterase inhibitor family protein
31
192
IPR035513
-
Vian1g00476
204
SUPERFAMILY
Plant invertase/pectin methylesterase inhibitor
32
191
IPR035513
-
Vian1g00476
204
SMART
PMEI_2
28
186
IPR006501
GO:0004857
Vian1g00476
204
PANTHER
PECTINESTERASE INHIBITOR-LIKE
13
186
-
-
Vian1g00476
204
NCBIfam
pectinesterase inhibitor domain
7
190
IPR006501
GO:0004857
Vian1g00476
204
Pfam
Plant invertase/pectin methylesterase inhibitor
33
185
IPR006501
GO:0004857
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vian1g00476
Vian-Chr1
4486555
4487169
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vian1g00476
33
193
Carbohydrate Esterase
AT3G14310
28.916
1.54e-14
69.7
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vian1g00476
-
-
gmx:100810705
241.891
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vian1g00476
1
4486555
4487169
Vian1g00476
1
4486555
4487169
ECH
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