Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00476 ATGCAAACGCAACCAATTTCCACTGTCGCCTTCACGCTCTTCCTTCTCTTGTTGTCTCCACCACGCGCCGCCGCGGCAAGGCCACCACCAGATCCACTTCGTACATCATGCGCGCAGGCCAGGTACCCCGCTCTATGCGTGCAAACCCTCTCCAACCTTTCCAACACCGCCGCCAAGCCCCTCGACCTTGCCCAGGCCGCCGTCAGAGCTAGTCTGGCCCGTACGCGCGGTCTCTCCGCCTACCTTTGGGCGCTAAAGGCTGCATCGCAGGGTTTCGAACTGAGGCAGCGAGTTGCGGTGAGTGACTGCGTGAAGCAGATATCCGACTCGGTGAGAGAATTGAGCAAGACGCTGAACGAGTTGCAGCACCTCCGCGACGAAACCTTCCAGTGGCAGATGAGCAACGTGCAGACCTGGACCAGCGCCGCCCTCACCAACGGCGACACTTGCATCTCCGGCTTTAACGCTGTCGCCGCCGCCGCCGCCGGGAATATCAAGTTGGAGCTCAAGCAAAGAGTCACCGACGTTTCCATGTTCACCAGCAACGCGCTTTACCTCATCAGCCGCCTCACTGATAGCGTCACGGGGAAGCCTCGCGCCAATTCCGGGAACTGA 615 0.6033 MQTQPISTVAFTLFLLLLSPPRAAAARPPPDPLRTSCAQARYPALCVQTLSNLSNTAAKPLDLAQAAVRASLARTRGLSAYLWALKAASQGFELRQRVAVSDCVKQISDSVRELSKTLNELQHLRDETFQWQMSNVQTWTSAALTNGDTCISGFNAVAAAAAGNIKLELKQRVTDVSMFTSNALYLISRLTDSVTGKPRANSGN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00476 204 Coils Coil 104 127 - -
Vian1g00476 204 CDD PMEI-like_3 35 191 - -
Vian1g00476 204 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 192 IPR035513 -
Vian1g00476 204 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 191 IPR035513 -
Vian1g00476 204 SMART PMEI_2 28 186 IPR006501 GO:0004857
Vian1g00476 204 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 186 - -
Vian1g00476 204 NCBIfam pectinesterase inhibitor domain 7 190 IPR006501 GO:0004857
Vian1g00476 204 Pfam Plant invertase/pectin methylesterase inhibitor 33 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00476 Vian-Chr1 4486555 4487169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00476 33 193 Carbohydrate Esterase AT3G14310 28.916 1.54e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00476 - - gmx:100810705 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00476 1 4486555 4487169 Vian1g00476 1 4486555 4487169 ECH