Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian1g00467 | ATGGCTAAAGGTGGAAAACTAATGAGGCTGAAATCGGTGCTGAAGAAATGGAACTCATTCGGCAACGGCAAGCAGAGCCGCCACAGCACCAGCGCCGTCGCCGACGATGAGTCCTCCTCCAGATCGGACCTCCACGCCGTCTACGTCGGCAAATCCCGCCGCCTCTACCGGGTCTCCTCCGGCGTCCTCGACAACCCCGTCTTCCGGGAACTGGTAGAGAGGTCCCGCGACGACTCCGACCACCAAGACGACACCATCAATGTCGCATGCGAGGTTGTCCTCTTCGAACACTTGCTGTGGATGCTCGAAAACGCCGACCCACAACCGGAGTCTCTCAACGAACTCGTCGACTTCTATGCCTGCTAA | 366 | 0.5847 | MAKGGKLMRLKSVLKKWNSFGNGKQSRHSTSAVADDESSSRSDLHAVYVGKSRRLYRVSSGVLDNPVFRELVERSRDDSDHQDDTINVACEVVLFEHLLWMLENADPQPESLNELVDFYAC | 121 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian1g00467 | 121 | PANTHER | EXPRESSED PROTEIN | 24 | 120 | - | - | |
Vian1g00467 | 121 | MobiDBLite | consensus disorder prediction | 19 | 37 | - | - | |
Vian1g00467 | 121 | Pfam | Auxin responsive protein | 10 | 102 | IPR003676 | GO:0009733 | |
Vian1g00467 | 121 | MobiDBLite | consensus disorder prediction | 19 | 42 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian1g00467 | Vian-Chr1 | 4370168 | 4370533 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian1g00467 | 3 | 102 | Calmodulin-binding Proteins | AT4G34750 | 26.733 | 8.49e-07 | 43.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian1g00467 | - | - | ccaj:109809545 | 209.92 |