Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00467 ATGGCTAAAGGTGGAAAACTAATGAGGCTGAAATCGGTGCTGAAGAAATGGAACTCATTCGGCAACGGCAAGCAGAGCCGCCACAGCACCAGCGCCGTCGCCGACGATGAGTCCTCCTCCAGATCGGACCTCCACGCCGTCTACGTCGGCAAATCCCGCCGCCTCTACCGGGTCTCCTCCGGCGTCCTCGACAACCCCGTCTTCCGGGAACTGGTAGAGAGGTCCCGCGACGACTCCGACCACCAAGACGACACCATCAATGTCGCATGCGAGGTTGTCCTCTTCGAACACTTGCTGTGGATGCTCGAAAACGCCGACCCACAACCGGAGTCTCTCAACGAACTCGTCGACTTCTATGCCTGCTAA 366 0.5847 MAKGGKLMRLKSVLKKWNSFGNGKQSRHSTSAVADDESSSRSDLHAVYVGKSRRLYRVSSGVLDNPVFRELVERSRDDSDHQDDTINVACEVVLFEHLLWMLENADPQPESLNELVDFYAC 121
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00467 121 PANTHER EXPRESSED PROTEIN 24 120 - -
Vian1g00467 121 MobiDBLite consensus disorder prediction 19 37 - -
Vian1g00467 121 Pfam Auxin responsive protein 10 102 IPR003676 GO:0009733
Vian1g00467 121 MobiDBLite consensus disorder prediction 19 42 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian1g00467 Vian-Chr1 4370168 4370533 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00467 3 102 Calmodulin-binding Proteins AT4G34750 26.733 8.49e-07 43.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00467 - - ccaj:109809545 209.92