Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00442 ATGGGCACTGGTAATAACATATCATGCCCTGCACCCATGAAGGCCACGTCCAACGGAGGGTTCCAACATGAAAACCCTCTGGATTATGCGCTTCCTCTGTTAATCCTCCAAATATGTTTGGTCGTTGCTTTTACTAGATTTCTTGCATTCCTCTTCAGACCCCTCAGACAACCCAGAGTCATTGCTGAAATCATAGGAGGAATACTACTCGGGCCATCTGCAATTGGGCGAAACGAGAAGTTTCTGAATGCGGTTTTTCCAGAGAAAAGCATCACAGTTCTTGACACACTGGCCAACATAGGTCTTTTGTTTTTTTTGTTTCTCGTGGGACTTGAGCTTGACATGCGTGCAATTCGACGTACTGGTCACAAGGCCTTAGGCATTGCCCTCTGTGGGATCACTGTGCCTTTTGTTCTTGGCATTGGCACTTCCATTGCTCTTCGAGCCACTGTATCCAAAGGTGCTGAGCTATTTCCTTTTCTAGTCTTTATGGGTGTTGCTCTCTCGATCACCGCCTTCCCTGTCCTTGCGAGGATCCTGGCTGAGCTTAAACTCCTAACAACTGATGTTGGTCGCATTGCAATGTCTGCTGCTGCTGTCAATGATGTTGCAGCTTGGATTCTTCTTGCTCTTGCCATAGCCCTTTCTGGTTCTGAAGCATCTCCCTTTGTTCCTCTCTGGGTATTGCTCTGTGGTGCTGCTTTTGTCATCTTTGTTGTCTTTGCCATTAGGCCGTTGCTTGTGGCTATGGCTAACCGTTCCCTGGAGGGTGAGCCAGTGAAGGAGCTCTACATATGCATCACGTTGACTCTGGTTTTGGCTTGTAGTTTTGTCACTGATACTATTGGAATTCATTCCCTCTTTGGGGCTTTTGTGGTTGGTACTGTTATGCCCAAAGAAGGTTCCTTTTCTGGGGTGTTGACTGAAAGGATAGAAGACTTGGTTTCTGGCCTTTTCATGCCATTATATTTTGTGTCCAGTGGGTTGAAAACTGATGTAGCAACAATTAAGGGAGGTCTTTCTTGGGCAATGCTAATGCTTGTTATATTCAACGCTTGCTTTGGGAAGATTATTGGCACTACTGTTGTTTCATTACTGTATAAGGTGCCTGCCAGAGAAGCCCTGGCTCTTGGATTTCTCATGAACACAAAGGGCTTGGTAGAACTCATTGTTCTCAACATTGGGAGGGACCTTAAGGTGCTGAATGACCAAGCATTTGCCATTTGTGTTGTCATGGCATTGTTTACCACCTTCATCTCCACCCCAATAGTGATGGCTGTATATAAACCAGCTCGCAGAGGAGCACCTTACAAGCACAAAACAATTCAACGAGATCCCGACACTGAGCTTCGAATGCTAGCTTGCTTCCACAGCACCCGTAACATTCCATCGCTGATCAATCTAATAGAGTGTTCCCGTGGAACAGGAAGGAAAGGAAAGCTTTGTATCTATGCAATGCATTTGATGGAGCTTTCGGAGCGATCTTCGGCAATCACAATGGTTCACAAGGCACACAAAAATGGCATGCCCTTTTGTAACAAGAAGCGGGACGGCAAAGATCAAATGATCATAGCTTTTCAGGCATATGAGAAATTGAGCAGTGTGAGTGTGCGACCCATGACAGTCATTTCTGGTCTCAATAGTATCCATGAGGATATTTGTACTACTGCTCACAGAAAGCGTGCAGCCATGATCATCCTTCCATTCCACAAACACCAACGTGTTGATGGATCGATGGAGTCACTGGGACATTCATTCCAAGAGATGAATCAACTTGTGCTATGTCATGCTCCTTGCTCGGTGGGAATTTTTGTTGATCGAGGTCTTGGAGGGACGAGCCAAGTCCAAGCCAGTGATGTGTCTTATAAGATAGTGGTACCCTTCTTTGGAGGGCGTGATGATCGTGAAGCTCTTTGTTATGGAATGAGAATGGCCGAGCACCCGGGTATTTTTCTCACCGTGCTTAAGTTTGTAACTCCACCAGGGACATCATTGGCCTTCGGTGCTAAATCGGTTGAGGTGTCATCAAAGAAATATAGGAAAACAATGGATGTGGTTGATGTCAATGATTATGATGATAAAGATGATCAATTGTGGAGTGAGTTTTTAAGTGCATGCAACAACAACACCCAAGAGACAATGAAGTATGAGCAAAAGCTAGTGGAAAGCAAAGGAGATATTGAGATAGCATTGAAGGAAATGCATAGATGCAACCTCATATTGGTTGGTAGAATGCCACCAGTGGCTCCTTTGGTTAGCAAAAGTGACTGTCCAGAGCTTGGACCTGTTGGAAGCTTTGTTGCTTCTTCAGATTTTTCCACTGTTACGTCAGTTATGGTAATTCAGCAATACAATCCCTCAACTGACGTTCATCCATTGGTGATGGAGGAATTTGATTCCGCAGATATGTCAGATTCACCAGGGAGTCAATAA 2433 0.4501 MGTGNNISCPAPMKATSNGGFQHENPLDYALPLLILQICLVVAFTRFLAFLFRPLRQPRVIAEIIGGILLGPSAIGRNEKFLNAVFPEKSITVLDTLANIGLLFFLFLVGLELDMRAIRRTGHKALGIALCGITVPFVLGIGTSIALRATVSKGAELFPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGSEASPFVPLWVLLCGAAFVIFVVFAIRPLLVAMANRSLEGEPVKELYICITLTLVLACSFVTDTIGIHSLFGAFVVGTVMPKEGSFSGVLTERIEDLVSGLFMPLYFVSSGLKTDVATIKGGLSWAMLMLVIFNACFGKIIGTTVVSLLYKVPAREALALGFLMNTKGLVELIVLNIGRDLKVLNDQAFAICVVMALFTTFISTPIVMAVYKPARRGAPYKHKTIQRDPDTELRMLACFHSTRNIPSLINLIECSRGTGRKGKLCIYAMHLMELSERSSAITMVHKAHKNGMPFCNKKRDGKDQMIIAFQAYEKLSSVSVRPMTVISGLNSIHEDICTTAHRKRAAMIILPFHKHQRVDGSMESLGHSFQEMNQLVLCHAPCSVGIFVDRGLGGTSQVQASDVSYKIVVPFFGGRDDREALCYGMRMAEHPGIFLTVLKFVTPPGTSLAFGAKSVEVSSKKYRKTMDVVDVNDYDDKDDQLWSEFLSACNNNTQETMKYEQKLVESKGDIEIALKEMHRCNLILVGRMPPVAPLVSKSDCPELGPVGSFVASSDFSTVTSVMVIQQYNPSTDVHPLVMEEFDSADMSDSPGSQ 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00442 810 Gene3D - 489 746 - -
Vian1g00442 810 FunFam Cation/H(+) antiporter 15 33 435 - -
Vian1g00442 810 Gene3D - 33 435 IPR038770 -
Vian1g00442 810 PANTHER CATION/H + ANTIPORTER 8 785 - -
Vian1g00442 810 Pfam Sodium/hydrogen exchanger family 39 424 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00442 Vian-Chr1 4073510 4076622 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00442 8 805 Antiporter Super Family AT3G17630 68.120 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00442 K26731 - gmx:100780382 1338.17