Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00441 ATGGTGGCGATAGGATTGTGCATGATTGTTGTTGAATGTAGGAAACATGTGAGCATAAAGAACAGGCTTGGAGCTGGAAAGAATATGACTTTGCATTGCCAGTCGAAGGACAATGATCTGGGACAACAAAATATAGCAAATGGAGATGAGTTTGGATGGGATTTCTCAGACAATATTATTGGAACAACACTGTTTTTCTGTGATGTGGGGTGGGAAAAGGTTGAGGAATACCATTTCAATGCTTATTCCTTCGGCAGGGACAGAGTACGATGTGATGGTGTCGGCTGTTCATGGCTCCTATCTGCTGAAGGCATTTATGGCTTCAATGTACAAACGGCCTTCTGGGAATTCATGTACCAATGGCCAAATTAA 372 0.4247 MVAIGLCMIVVECRKHVSIKNRLGAGKNMTLHCQSKDNDLGQQNIANGDEFGWDFSDNIIGTTLFFCDVGWEKVEEYHFNAYSFGRDRVRCDGVGCSWLLSAEGIYGFNVQTAFWEFMYQWPN 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00441 123 PANTHER - 11 109 IPR010264 -
Vian1g00441 123 Pfam Plant self-incompatibility protein S1 16 121 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00441 Vian-Chr1 4054463 4054834 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00441 14 121 Carbohydrate Esterase AT3G16970 31.818 1.45e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00441 - - vra:106767420 247.284