Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00440 ATGGGGAGGGATAAGAACGCGTCATGTTCCGCAGCCATGAGGGCAGAATCCAACGGAGGATTCCAACATGAAAACCCTCTGGATTATGCGCTTCCTCTGTTAATCCTCCAAATATGTTTGGTCGTTGCTTTTACTAGATTTCTTGCATTTCTCTTCAGACCCCTCAGACAACCCAGAGTCATTGCTGAGATCATTGGAGGAATACTACTTGGGCCATCGGCAATTGGGCGAAACGAGAAGTTTTTGAATGCAGTTTTCCCAGAGAAAAGCATCACAGTTCTTGAAACACTGGCCAACATAGGTCTTTTGTTCTTTTTGTTTCTCGTGGGACTTGAGCTTGACATGCGTGCAATTCGACGAACTGGTCGTAAGGCCCTTGGCATTGCCATCTGTGGGATCATTCTACCTTTTATTCTTGGGATTGGCACTTCCATTGCTCTTCGAGCCACTGTATCCAAAAGTGTTGAGCTATTTCCTTTTCTAGTCTTCATGGGTGTTGCTCTCTCGATCACCGCCTTCCCTGTCCTTGCGAGGATCCTGGCTGAACTTAAACTCCTAACCACTGATGTTGGTCGCATTGCAATGTCTGCTGCTGCTGTCAATGATGTTGCAGCTTGGATTCTTCTTGCTCTTGCGATAGCCCTTTCTGGTTCTGATGCATCCCCCTTTGTTCCTCTTTGGGTATTGCTCTGTGGTGCTGCTTTTGTCATCTTTGTTGTCTTTGCCATTAGGCCGTTGCTTGTGGCTATGGCTAACCGTTCCCTGGAGGGTGAGCCAGTGAAGGAGCTCTACATATGCATCACATTGACTCTGGTTTTGGTTTGTAGTTTTGTCACTGATACTATTGGAATTCATTCCCTCTTTGGGGCTTTTGCGGTTGGTACTATTATGCCAAGAGAAGGTTCCTTCTCTAGGGTGTTGACTGAGAGGATAGAAGACCTGGTATCTGGCCTTTTCATGCCACTATATTTTGTGTCCAGTGGCTTGAAAACTGATGTGGCAACAATTAAGGGAGGTCTTTCTTGGGCAATGCTAATGCTTGTTATATTCAATGCTTGCTTTGGGAAGATCATTGGTACTACTGTTGTTTCCTTATTGTGTGAGGTGCCTTCCACAGAAGCCCTGGCTCTTGGATTTCTCATGAACACAAAAGGCTTGGTGTTAAATGACCAAGCATTTGCCATTTGTGTTGTCATGGCATTGTTTACCACCTTCATCTCCACCCCAATGGTGATGGTTGTATATAAACCAGCTCGTAGAGGAGCACCTTACAAGCACAAAACAATTCAACGAGATCCCGACACTGAGCTTCGAATGCTAGCTTGCTTCCACAACACCCACAACATTCCCTCGCTAATCAATCTAATAGAGTGTTCCCGTGGAACCGGAAGAAAAGGAAAGCTTTATGTATACACAATGCATTTGATGGAGCTCTCGGAGCGATCTTCGACAATCACAATGGTTCATATGGCACGCAAGAATGGAATGCCCTTTTGGAACAAAAAGCGGAATGGCAAAGATCAAATGATCATAGCTTTTCAGGATTATGAGAAACTGAGAAGTGTGAGTGTCCGCCCCATGACAGTCATTTCTGGTCTCAATAGCATCCATGAGGATATTTGTACTACTGCTCACAGAAAGCGTGCAGCCATGATCATCATTCCATTCCACAAACACCAACGTGTGGATGGATGGATGGAGTCACTGGGACATTCATTCCAAGAGATGAATCAACTTGTGCTATGTCATGCTCCTTGCTCGGTGGGAATTTTTGTTGATCGAGGTCTTGGAGGGACGAGCCAAGTCCAAGCCAGTGATGTGTCTTATAAGATAGTGGTACCCTTCTTTGGAGGGCGTGATGATCGTGAAGCTCTTTGTTATGGAACGAGAATGGCCGAGCACCCGGGAATTTTTCTAAATGTGTATAAGTTTGTAACTCCACCAGGGACATCATTGGCCTTTGATGCTGAATCGGTTGGGGAGTCATCAAACAAAGATAGGAAAACAGTGCATGTGATTGACGACAACGATTATGATGATAAGAAACAGGATGATCAATTGTGGAATGAGTTTTTAAGTGCATGCAACAACAACACCCAAGAGACAATGAAGTATGAGGAAAAGCTAGTGGAAAGCAAAGGAGATATTGAGACAGCATTGAAGGAAATGAATAGATGCAACCTCATATTGGTTGGTAGAATGCCATCAGTGGCAGCTTTGGGTAGCATAAGTGATTGTCCAGAGCTTGGACCTGTTGGAAGCTTTGTTGCTTCTTCAGATTTTTCCACTCTTACGTCTGTAATGGTAATTCAGCAATACAATCCCTCAACTGACATACATCCGTTTGTGAGGGAGGAATCTGATTTACCAGATATGTCACATACACCAGCTGGGGGTTAA 2400 0.4462 MGRDKNASCSAAMRAESNGGFQHENPLDYALPLLILQICLVVAFTRFLAFLFRPLRQPRVIAEIIGGILLGPSAIGRNEKFLNAVFPEKSITVLETLANIGLLFFLFLVGLELDMRAIRRTGRKALGIAICGIILPFILGIGTSIALRATVSKSVELFPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGSDASPFVPLWVLLCGAAFVIFVVFAIRPLLVAMANRSLEGEPVKELYICITLTLVLVCSFVTDTIGIHSLFGAFAVGTIMPREGSFSRVLTERIEDLVSGLFMPLYFVSSGLKTDVATIKGGLSWAMLMLVIFNACFGKIIGTTVVSLLCEVPSTEALALGFLMNTKGLVLNDQAFAICVVMALFTTFISTPMVMVVYKPARRGAPYKHKTIQRDPDTELRMLACFHNTHNIPSLINLIECSRGTGRKGKLYVYTMHLMELSERSSTITMVHMARKNGMPFWNKKRNGKDQMIIAFQDYEKLRSVSVRPMTVISGLNSIHEDICTTAHRKRAAMIIIPFHKHQRVDGWMESLGHSFQEMNQLVLCHAPCSVGIFVDRGLGGTSQVQASDVSYKIVVPFFGGRDDREALCYGTRMAEHPGIFLNVYKFVTPPGTSLAFDAESVGESSNKDRKTVHVIDDNDYDDKKQDDQLWNEFLSACNNNTQETMKYEEKLVESKGDIETALKEMNRCNLILVGRMPSVAALGSISDCPELGPVGSFVASSDFSTLTSVMVIQQYNPSTDIHPFVREESDLPDMSHTPAGG 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00440 799 PANTHER CATION/H + ANTIPORTER 8 774 - -
Vian1g00440 799 FunFam Cation/H(+) antiporter 15 33 422 - -
Vian1g00440 799 Gene3D - 33 422 IPR038770 -
Vian1g00440 799 Pfam Sodium/hydrogen exchanger family 39 387 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00440 Vian-Chr1 4049626 4052693 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00440 6 794 Antiporter Super Family AT3G17630 64.508 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00440 K26731 - gmx:100780382 1266.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00440 1 4049626 4052693 Vian1g00440 1 4049626 4052693 ECH