Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00375 ATGAACGAAGTCTTCCGAGATTACTCAGAAATTGACATATACAACATTTATGCCCCGGCATGTCATTCAAACAGTACATCCTCAATAGCTGATGATAGCAACAGTGACGGCCCCGAATCATTTACCAAGGTGAGAAATTATCATAGAGAACGAAGGATGAGAATTTTTGGGGGCTATGATCCTTGCTATTCCAATTATGCAGAAGAGTATTTCAACAGAAAAGATGTTCAATCATCATTTCATGCAGACACTAAAAGAGCCACTAACGTGGCATGGAAGGTTTGCAATAATTCCGTATTGAGGGCTTACAACTTCTCTGTGTTCTCGGTCCTACCCATCTACACCAAACTCATAAAGGGTGGGCTTAAGATATGGATATACAGTGGAGACGCAGATGGAAGAGTGCCAGTGATAGGGACAAGATATTGCGTTGAGGCTCTTGGATTACCTCTCAAATCTAGGTGGCGAACATGGTACCATGATAATCAGGTTGGAGGAAGAACAGTGGAATATGAAGGATTGACGTATGTGACAGTGAGAGGAGCTGGTCACTTGGTGCCATTGAACAAGCCTAGTGAAGCTCTCACTCTTATTAATTCCTTCTTAAAAGGAGACCATCTTCCTATTCGTGGATAA 636 0.4214 MNEVFRDYSEIDIYNIYAPACHSNSTSSIADDSNSDGPESFTKVRNYHRERRMRIFGGYDPCYSNYAEEYFNRKDVQSSFHADTKRATNVAWKVCNNSVLRAYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRVPVIGTRYCVEALGLPLKSRWRTWYHDNQVGGRTVEYEGLTYVTVRGAGHLVPLNKPSEALTLINSFLKGDHLPIRG 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00375 211 Gene3D alpha/beta hydrolase 2 208 IPR029058 -
Vian1g00375 211 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 191 IPR001563 GO:0004185|GO:0006508
Vian1g00375 211 FunFam Carboxypeptidase 110 204 - -
Vian1g00375 211 Pfam Serine carboxypeptidase 7 204 IPR001563 GO:0004185|GO:0006508
Vian1g00375 211 FunFam Carboxypeptidase 59 207 - -
Vian1g00375 211 SUPERFAMILY alpha/beta-Hydrolases 4 207 IPR029058 -
Vian1g00375 211 ProSitePatterns Serine carboxypeptidases, histidine active site. 174 191 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00375 Vian-Chr1 3318011 3319176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00375 63 207 Calmodulin-binding Proteins AT2G22960 28.082 1.19e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00375 K16297 - gmx:100815141 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00375 1 3318011 3319176 Vian1g00375 1 3318011 3319176 ECH