Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00344 ATGGTTGACACTTTCAGTGTAGAGAGTAGGCTTCATATAAGAGAGTTTGATGAAGGTAGAGATGTTAAGGTGGTGGGGAAGCTTGAGAGGAAGTGTGAGATTGGGACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTATATCCCCTTCATGTTATGTTGGTGGCTGAGCTGCTTGAAAGCAAGGAGCTTGTGGGTGTGGTTCGAGGGTGCATTAAGAGTATGAGAACTCCTTCTGAATCATTGCTGAAGATTGGTTGCATACTAGGCCTTAGAGTCTCTCCTTCACACAGGAGAAAGGGGATTGGACTGAAACTTGTCACCTCAGTTGAAGAATGGATGCTGAGAAATGGGGCTGAATATGCATTCCTGGCAACTGAAAAGAACAACGATGCCTCTAGAAACCTATTTACCAACAAATGCAAATATGTGAGCCTCAGCTCACTTTTCATATTTGTGCATCCAATTAGTTTCCCTGCAAAGCAGATTTCCAAGGATATAGAAATTGAGAAGGTAAACATAGACCAGGCAATTTCGTTATACAGAAGAACCCTGATGGCCAAAGAGCTTTACCCATTAGACATGGATAGTATTTTGAAGGAGAATCTCAGCTTGGGCACCTGGGTGAGTTATTACAAAGAGGGAGGCTTACTCAACTTGCAGAGAAAGGAAGAGAGTGAAGACATTATTACCAATGAAATCACAAGCTCATGGATCATCTTTAGCATATGGAATACTTGTGAGGCTTACAAGCTTCAACTTAAAAAGTCTCAGCCACTTAGGTTTCTTCACACAGCTTTAAATCATGCAAGAGACAAAATCTTCCCTTGTCTGAGAATGTCGGTGAGTGACTCACTGTGCAGGCCCTTTGGGTTTCTCTTCCTCTATGGGCTCCACGGAGAGGGAGAGAACCTTGGGGAGCTAATGGAATCCATATGGAGGTTCACATCAAGGATGGGAGAAAGTTTGAAGGACTGCACAGTGGTTATAACGGAGCTAGGGTTTGGTGATCCACTTGTAAACCATATCCCTCAAACAGCTTCCATGTCGTGTATCGATGATATTTGGTACACGAAAAGAATTTCAAGCCACAGTGACGAAAAGGATGATGAACTGCTGATTAAGAGACAAATCGGGAATGTGTTTGTTGACCCTAGAGATTTTTAG 1194 0.4288 MVDTFSVESRLHIREFDEGRDVKVVGKLERKCEIGTKKGVSIFTNMMGDPLSRIRLYPLHVMLVAELLESKELVGVVRGCIKSMRTPSESLLKIGCILGLRVSPSHRRKGIGLKLVTSVEEWMLRNGAEYAFLATEKNNDASRNLFTNKCKYVSLSSLFIFVHPISFPAKQISKDIEIEKVNIDQAISLYRRTLMAKELYPLDMDSILKENLSLGTWVSYYKEGGLLNLQRKEESEDIITNEITSSWIIFSIWNTCEAYKLQLKKSQPLRFLHTALNHARDKIFPCLRMSVSDSLCRPFGFLFLYGLHGEGENLGELMESIWRFTSRMGESLKDCTVVITELGFGDPLVNHIPQTASMSCIDDIWYTKRISSHSDEKDDELLIKRQIGNVFVDPRDF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00344 397 CDD NAT_SF 62 133 - -
Vian1g00344 397 Gene3D - 21 162 - -
Vian1g00344 397 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 233 IPR000182 GO:0016747
Vian1g00344 397 Pfam Acetyltransferase (GNAT) family 65 150 IPR000182 GO:0016747
Vian1g00344 397 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 147 IPR016181 -
Vian1g00344 397 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00344 Vian-Chr1 3067607 3069189 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vian1g00344 Acetyltransf_1 2.6e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00344 - - vum:124845889 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00344 1 3067607 3069189 Vian1g00344 1 3067607 3069189 ECH
Vian1g00344 1 3067607 3069189 Vian6g01107 6 28550146 28552374 PCT