Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00321 ATGAGAGTTCAGAAAGAAGGAGCAAAAGATGAAGGTGGCTTTTTCCACATGTTTGACTGGACCTCAAAATCACGGAAGAAATTATTTTCAACCACGCCGGAGTCCTTGAAACAAAGAAGAAAAGTTGATGGCAACTTGGCAACTATGCTTCCCTATCTGGTGGACGAAGATGATGAAATTGGAATAGGGGGAAGTATTAGAGATAGTGGTGATCATAGCTGTGCTACTTCTGTTATAGATTCTGAAGTATGTGGAACAAGGGCCCCTGGTGTAGTTGCCAGGCTTATGGGATTGGATTCAATGCCGTTTTCTAGTTTTTCTGATCCATATTCTACCCCATATTTTGACAGCCAATGCATTCAAGATGTGCAGTACTGGAGGAAAAATCTCAATCATCTTCATGATCATCAGATTCTATATTCTGGAAAGTTGGTTGAAAAAGCTGAGGGAACCTCTAGGAACTTCATGGAGAAGCCTCTACAGACCCGTAGCAGGCCGATTGAAAAGTTTCAAACAGAAGTAATGCCTCCCAAATCAGCTAAATCTATTCCCCTTACTCACCATAAACTTTTGTCCCCAATTAAGAATCCTGGCTTTGTTCCATCAAATAATGCTACATACATAATGGAAGCTGCAGCAAGAATTATTGAACCTGGACGCCAAGCTGCTACAAAGGCTAAAGCACCTCTGGTAACATCATCAACAGTATCATTGAGGGTCAGAGACCTTAAAGAAAAAGAGGCTTCACAAAAGGGACAACTAATTAGTTCATCTTCAGAGACCTCTAGAGTTAGAGATACAAAAGGAAAAAGAGAAACCTCTCTAAGAACTAGTAGGCTTTCTGAAACTTCTCATAGGTTGTCTGAGTCTAATGATGCCAAATATCTAAACGGACAATCTTTGAACAAAAGTTGGAACGGAGTTGTGGATACACCTATCAGATCATCTACTCAAGTAGAAGAAGATTGTTATTCAAAAAATAAAGGGAAGTCTATATCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGCTTGAGTTTTAGTAGTGGAAAAAGTTTAGTGGAGCAGAGAGAGCAATGTGACACTAAAAACTCCCAGAAGCCTCTGAAGGCGAATGTTCAAAAAGGTTTGCACATGAAATCCTCTGGTCAAGATGCTTCTAGTGTTCTCAGGCAGAATAATCAGAAACAGAATTGTCCAATGGATAAAGACAAACTACCATCAAAGCCATTGGTTTCCAATTCACAAGGTAGAAAAGTTGTCACTGGGGATTCTTCTAGTGGACGTCATAGAAGCTCTAGTAATAAATCCGTAGCAAAATCTAAAGCTGGGCCCAAAAAACCATCAACGAGTGTTTCAGACAGTGAAAAGGAAGTCTTGTATACTCGTACAAACAATTTCCCAAGGAAGAAGAGGTCTACAGACAGGGACTGGAATGATAGGGTTGTTGATAATTTATTCATCGACAAATCACAGAAGCCTGTTCAGTCTAATGTAGTTAGTAATAAATGCCATGGTGAGGCTGAAGAAGTAAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACCATGCCCTTGACAAGAAGCAATTCTGGTTTTGAGACACCTGGCCTAAATTCCTTGGATCAGCATATTAGAAGAGTGTTGGTTGATACTGAAACTGATAATGCAGGGTCTCCTGTAGGATACAGTGCAGTTGGTGGTGATGCCTTGGGTATTCTTTTGGATCAGAAGTTGAGGGAGTTAACATATGGAATTGGGGACTCTTGTGATGACTCTCTCAAAGCAAGGTCACCCTACAGCACTGCACCAAAAGTTGCAGGGTCACCCACCCTTTATTCAGTTAACCTCTTTCCAGGGTTGCAACAGAAGAAAGATCAAGACATAATGTCGACAGATAAATTATTCAGTAGCCGCACCTGTCTTCCAGAACTATCATCCCAGCATAGGCTTCGGCTTGATAAGATGGAGGAGTGTGAGATGAATCCTATGGAAGCAGGGTTATTCAATTCAGGACAGCCGAGTCCAATATCTGTTCTTGACCCTTCTTTTTCCACTGAAAGCTGTGAATCTCCATTCAGCGCAAATGCTTCCAGTTCAGAAGACCAAAAATGGAGGAAGCAAGTTGTGGGCTCAGGAAGTGGCTATAGAGACTTGTTTGATTCAGCATCAGCTTGGACCATGCTAAGGAAACAATCAAGTACATGTTCCCAAATGAAGATTGGACAATCAAGCACATGGGAGTTAGAGTATGTAAATGATATATTGTGTAATGTGGAGTTGATGTACATGGACTTTTCTCTTGGCAGAGCTCGTGAGATCGTGAACCCTCATCTGTTCAACCAGTTGGAAAATCGAAGGGGAAGGTTTGAGAGTGATAGTGGTGAGTGCAGAATAAGAAGGAAAGTTATATTTGATTGTGTGAGTGAGTGCTTAGACTTGAGATGCAGGCGATATGTTGGTGGAGGTTACAAAATGTGGGCAAAAGGGGTTGCAATGGTGAGAAGAAATGAATGGTTGGCAAAGGAAGTGTGGAAGGAAATTTCAAGTTGGAGAGATATGAGGGACTCAATGGTGGATGAACTGGTAGATAGGGACATGAGCATCCAATATGGACAATGGCTAGATTTTGAGGTTGATACTTTTCAACTTGGTGCAGTAATTGAAGACCAAATATTTGATTCTTTGGTTGATGACTTCGTTGCAGAAATCCTGCAACTGTAA 2736 0.4101 MRVQKEGAKDEGGFFHMFDWTSKSRKKLFSTTPESLKQRRKVDGNLATMLPYLVDEDDEIGIGGSIRDSGDHSCATSVIDSEVCGTRAPGVVARLMGLDSMPFSSFSDPYSTPYFDSQCIQDVQYWRKNLNHLHDHQILYSGKLVEKAEGTSRNFMEKPLQTRSRPIEKFQTEVMPPKSAKSIPLTHHKLLSPIKNPGFVPSNNATYIMEAAARIIEPGRQAATKAKAPLVTSSTVSLRVRDLKEKEASQKGQLISSSSETSRVRDTKGKRETSLRTSRLSETSHRLSESNDAKYLNGQSLNKSWNGVVDTPIRSSTQVEEDCYSKNKGKSISLAIQAKVNVQRREGLSFSSGKSLVEQREQCDTKNSQKPLKANVQKGLHMKSSGQDASSVLRQNNQKQNCPMDKDKLPSKPLVSNSQGRKVVTGDSSSGRHRSSSNKSVAKSKAGPKKPSTSVSDSEKEVLYTRTNNFPRKKRSTDRDWNDRVVDNLFIDKSQKPVQSNVVSNKCHGEAEEVKKKDMDVVSFTFTMPLTRSNSGFETPGLNSLDQHIRRVLVDTETDNAGSPVGYSAVGGDALGILLDQKLRELTYGIGDSCDDSLKARSPYSTAPKVAGSPTLYSVNLFPGLQQKKDQDIMSTDKLFSSRTCLPELSSQHRLRLDKMEECEMNPMEAGLFNSGQPSPISVLDPSFSTESCESPFSANASSSEDQKWRKQVVGSGSGYRDLFDSASAWTMLRKQSSTCSQMKIGQSSTWELEYVNDILCNVELMYMDFSLGRAREIVNPHLFNQLENRRGRFESDSGECRIRRKVIFDCVSECLDLRCRRYVGGGYKMWAKGVAMVRRNEWLAKEVWKEISSWRDMRDSMVDELVDRDMSIQYGQWLDFEVDTFQLGAVIEDQIFDSLVDDFVAEILQL 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00321 911 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 3 907 - -
Vian1g00321 911 MobiDBLite consensus disorder prediction 344 478 - -
Vian1g00321 911 MobiDBLite consensus disorder prediction 242 295 - -
Vian1g00321 911 MobiDBLite consensus disorder prediction 368 404 - -
Vian1g00321 911 Pfam Domain of unknown function (DUF4378) 752 903 IPR025486 -
Vian1g00321 911 MobiDBLite consensus disorder prediction 412 465 - -
Vian1g00321 911 MobiDBLite consensus disorder prediction 263 289 - -
Vian1g00321 911 MobiDBLite consensus disorder prediction 344 358 - -
Vian1g00321 911 Pfam DUF761-associated sequence motif 77 106 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00321 Vian-Chr1 2855326 2858940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00321 6 909 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.258 2.19e-95 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00321 - - gmx:102660038 1351.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00321 1 2855326 2858940 Vian4g00083 4 761762 765474 PCT