Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian1g00308 | ATGGCTTCAACGGACGTCAGAGGAATTTTAACAGCTTTCAATCCTTCTCTGGACTTCTTCGCTATAACTGCCGGAGATGGTCGCGTCAAGATATGGGACACGCTGAGTGGCCAGGTCCAGACCGAGTTCGCAGATATTGCATCAACTCATTCAACAACTACGCCACAGAACAAATCCATTAACGGCCATCTTGCACTAGATTATACCTGCATCAAGTGGTTCTCCTTCGAAAGAAAGAGGAAACGGAAGCATGCATCCTCGTTGTTAGTACTTGGAACTGGTAGCGGTGATGTTCTAGCACTTGATGTTGATGCTGGTCATTTAAGTTGGAGAATTACTGACTGTCATCCCGGAGGTGTGAGAGCCATTGCATCTTCAGCAAACGTGTCAAGCATTTATACAGCTGGTGCAGATGGGATGGTATGTGCGATAGATTTTATGACAGGAAACCTGTTGGAGAAATTTAAGGCTTCTACCAAGGCGGTGTCCTGCATGTGTGTTTCTCCAGATGGGAAGACATTAGCTACTGCAGCTGCACAATTGAAGATTTTTAACTGCTCTAATCACAAAAAGATTCAAAAGTTCTCTGGTCATCCTGGTTCTGTTCGATGCATGGTTTTCACTGAAGATGGCAAGTATATCCTCTCGTCCGCTGTTGGTGAAAGATATGTTGCTGTTTGGAGGATAGATGGTCCTAAAAAGCAGTCAGCTAGTTGTGTTCTTGCGATGGAGCATCCGGCTGTCTTTCTTGATAGCAGGTGCATTGATAGTGTGGGGGATGACATGCCTGGCATATGTGTTTTGGCCATTTCAGAAGTTGGCATTTGTTATTTATGGTTTGGTAATAGTATTGAAGAACTGCGTAATGCAAAAGCCACAAAAATATCATTATCTTTAGAAGACATGTCCTCCAGAAATTACAGAGGAACTCTGCCAGCAATATATGCGGCAAAATTACAAGGCATCCAGAAGCCAGCCTCTGGGCAAGTTTTTCTTGTTTATGGGTTGCTTGTAAAGCCATCATTCAGAAAAGTTCTTGTGCATTCTGGTACAGACGTAAAGTTGAATGTCTCTCGCGATGGTGTTCTTCTACCAACAAGTCAAGCTCTCGTCAAATCTAAGAAGGGAACAAATGCACAAACAGTTACTGCACTAGACCGAGCTAATGCTGAGGATGCCTTGCTTCCAATTCCTAAGATTTTTAATTCCCAAGAGAACGAGAAAGAGAAAGCATTTCAAAAACCTTTGGACAAGGATATAATTGATGATTTGTGGAGAAATGATGAGTCTGTTGAAATGGAAGATGATATGGCCCATAGTGAGGCTGATGAACTTTGCATGGAGGACCTGCTAAAATCACTAGGGATGCTTTCCGGTGAAAGTGAATATGCATCAAACATTGAACTTTGCTCTAAGTTGTTGAAGGGTATTGATGTCGATGCTACTGTTCCAGTGAAAAAGATAAGAGCAACTGTTTTGTCTATGGAGCCAAGCAAAGCATTCATGCTACTGGAAGCGTTACTGGCTGCATGGGAATCAAGGTCATCTAGTGGAAAGTACATTCTTCCATGGATATACAGCATATTAGTGAATCATGCTCAAAATGTCATTGCTGAGGAATCTGATACACGTACGCTTGATACCTTAGACAAGATTAGCAATTTTAGAGGGGCAGCTCTTCAGCCTTTATTACAATTATCAGGTCGTCTCCAACTGGTGACATCACAGATTGACAAAGCCTCCCAGACTATAAGCCATTCGGTGCATGAACTCCAAACAGAAGAAAGTGAAGATGAAGATGAAGATGAAACTAAGGATGAATATTATCACGAGGGAGATGATACTTCTGAAATAAGTACTGATGATGAAAGCTAG | 1875 | 0.4224 | MASTDVRGILTAFNPSLDFFAITAGDGRVKIWDTLSGQVQTEFADIASTHSTTTPQNKSINGHLALDYTCIKWFSFERKRKRKHASSLLVLGTGSGDVLALDVDAGHLSWRITDCHPGGVRAIASSANVSSIYTAGADGMVCAIDFMTGNLLEKFKASTKAVSCMCVSPDGKTLATAAAQLKIFNCSNHKKIQKFSGHPGSVRCMVFTEDGKYILSSAVGERYVAVWRIDGPKKQSASCVLAMEHPAVFLDSRCIDSVGDDMPGICVLAISEVGICYLWFGNSIEELRNAKATKISLSLEDMSSRNYRGTLPAIYAAKLQGIQKPASGQVFLVYGLLVKPSFRKVLVHSGTDVKLNVSRDGVLLPTSQALVKSKKGTNAQTVTALDRANAEDALLPIPKIFNSQENEKEKAFQKPLDKDIIDDLWRNDESVEMEDDMAHSEADELCMEDLLKSLGMLSGESEYASNIELCSKLLKGIDVDATVPVKKIRATVLSMEPSKAFMLLEALLAAWESRSSSGKYILPWIYSILVNHAQNVIAEESDTRTLDTLDKISNFRGAALQPLLQLSGRLQLVTSQIDKASQTISHSVHELQTEESEDEDEDETKDEYYHEGDDTSEISTDDES | 624 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian1g00308 | 624 | MobiDBLite | consensus disorder prediction | 594 | 608 | - | - | |
| Vian1g00308 | 624 | SUPERFAMILY | Quinoprotein alcohol dehydrogenase-like | 12 | 233 | IPR011047 | - | |
| Vian1g00308 | 624 | Pfam | WD domain, G-beta repeat | 191 | 227 | IPR001680 | GO:0005515 | |
| Vian1g00308 | 624 | Pfam | WD domain, G-beta repeat | 10 | 33 | IPR001680 | GO:0005515 | |
| Vian1g00308 | 624 | Gene3D | - | 5 | 142 | IPR015943 | GO:0005515 | |
| Vian1g00308 | 624 | Gene3D | - | 143 | 262 | IPR015943 | GO:0005515 | |
| Vian1g00308 | 624 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 12 | 42 | IPR001680 | GO:0005515 | |
| Vian1g00308 | 624 | SMART | WD40_4 | 148 | 185 | IPR001680 | GO:0005515 | |
| Vian1g00308 | 624 | SMART | WD40_4 | 188 | 228 | IPR001680 | GO:0005515 | |
| Vian1g00308 | 624 | SMART | WD40_4 | 3 | 33 | IPR001680 | GO:0005515 |
Showing 1 to 10 of 15 entries
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian1g00308 | K14546 | - | gmx:100784148 | 995.342 |
Showing 1 to 1 of 1 entries