Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00302 ATGGTTCTTTTTCCATCTTTTGTGAATGGATTGGCAAGAACTGTGTCAATCAAGAAGGAGAAGAATTGTAAAAGGGAAGATGGAAGGACAGCTGCAGAAGAATTGGCAAAGGAAGCGAGGAAAAGTGAACTGTTACTGAGTTCATCTGGAGTTGTTAGGTCGACAAAGGCCAACAATTTTGCTTCTGTGTTCACTAATAGGGGACGGAAAGGAGTGAATCAGGATCGTCTTCTTGTTTGGGAGGAATTTGGATGCCAACAAGACATCATGTTCTGTGGAGTTTTTGATGGGCATGGCCCTTGGGGACACTTTGTAGCAAAAAGGGTCAAGAAACTAGTGCCAACAATTTTGCTGTGCAATTGGCAAGAAAATCTGGCTGCAACATCACTTGACCTGGATTTTAAGATGGAAGCAGACAGACATATCCATGGATTGAACGTGTGGAAGCAGTCCTACATCAAGACTTATGCTGCGGTTGATCAGGATCTGAAGCAGCAAACCGGGTTCGATTCATTTCTTAGTGGCACAACAGCATTGACAATTATCAAACAGGGTGAATATCTTATTACAGCAAACATAGGTGATTCTAGGGCTGTCTTGGCAACCATTTCAGAGGATGGCACATTAACTCCACATCAGCTTACCACTGACTTCAAGCCAAATTTACCACAGGAAGCTGAACGCATAACACAATGCAGAGGGCAGGTATTTAGTTTGGAAGATGAACCAGGAGTGTACAGGGTGTGGATGCCAAATGGTAAACCACCAGGACTAGCAATATCAAGAGCTTTAGGAGATCACTGCATGAAGGACTTTGGACTAATCTCTGTGCCTGATGTCACACAAACAAAAATTACAACCAGGGATCAATTTGTCATATTGGCAACAGATGGGGTATGGGATGTTATATCCAATCAGGAAGCAGTGGAGATTGTTTCTGCATCACCACATAAAGAAAAAGCAGCTCAAAAGCTTGTTAAATGCGCCATACGTGAATGGAAGCGGAAGAGAAGTGGCATTGCTATGGATGACATGTCAGCTATTTGCCTCTTCTTTCACTCCTTCCCTTCTCAAAAACTCCCAGCCATTAAAACTGTTGATTAA 1104 0.4284 MVLFPSFVNGLARTVSIKKEKNCKREDGRTAAEELAKEARKSELLLSSSGVVRSTKANNFASVFTNRGRKGVNQDRLLVWEEFGCQQDIMFCGVFDGHGPWGHFVAKRVKKLVPTILLCNWQENLAATSLDLDFKMEADRHIHGLNVWKQSYIKTYAAVDQDLKQQTGFDSFLSGTTALTIIKQGEYLITANIGDSRAVLATISEDGTLTPHQLTTDFKPNLPQEAERITQCRGQVFSLEDEPGVYRVWMPNGKPPGLAISRALGDHCMKDFGLISVPDVTQTKITTRDQFVILATDGVWDVISNQEAVEIVSASPHKEKAAQKLVKCAIREWKRKRSGIAMDDMSAICLFFHSFPSQKLPAIKTVD 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00302 367 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Vian1g00302 367 FunFam Probable protein phosphatase 2C 34 51 354 - -
Vian1g00302 367 Gene3D - 47 354 IPR036457 -
Vian1g00302 367 SMART PP2C_4 51 350 IPR001932 -
Vian1g00302 367 SUPERFAMILY PP2C-like 53 354 IPR036457 -
Vian1g00302 367 PANTHER PROTEIN PHOSPHATASE 42 350 IPR015655 GO:0004722|GO:0006470
Vian1g00302 367 Pfam Protein phosphatase 2C 82 331 IPR001932 -
Vian1g00302 367 CDD PP2Cc 59 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00302 Vian-Chr1 2666885 2668635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00302 1 353 PP2C-type Phosphatase Gene Family AT3G05640 58.028 6.72e-159 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00302 - - gmx:100817397 658.677