Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00280 ATGGGTGGCCAGATGCAGCAGAGCAATGCAGCGGCCACTGCTCTGTATGACCACGCCGGCGCCGGATCTCTCCATAATGCGGCGGGGCCGGCTACCGATGCCGGCGACGCGGTCATGGCGCGCTGGTTACAATCCGCCGGCTTGCAGCATCTGGCCTCTCCACTGGCTTCCACTGGTATCGATCAACGCCTCCTTCCCAATCTTCTTATGCAGGGTTATGGAGCGCAGTCTGCAGAAGAAAAGCAGAGGCTTTTTAAGTTAATGAGAAACCTCAATTTTAACGGGGAATCTGGTTCTGAGCCATATACGCCCACTTCCCAAAATTTAAGTGGAGCGACGGTATCAGATGGGTTTTATTCTCCAGACTTCAGGGGAGATTTTGGAGCCGGGCTTCTGGATCTTCACGCTATGGATGATACAGAGCTTTTGTCCGAGCATGTTATTTCAGAACCCTTTGAGCCATCACCCTTTATGCCTGGAGGTGCTAGAGCTTTTGAAGATGACTTCAATCCAATTAGCAGAAAGCAGGAAAGAGGAGAAGCAGATGTTGGTGCATCAGTTTTTGTACCTACAAATGAAAAAGAGAATAATACAAGAGAAAATAATGTTGCTAAGATTAAAGTTGTGGTACGCAAAAGACCTTTAAATAAGAAGGAGCTTGCTAAGAAGGAGGATGACATTGTAACTGCATATGACAGTGCATATTTGACAGTCCATGAACCAAAACTAAAGGTGGATTTGACAGCTTATGTGGAGAAGCATGAGTTCTGTTTTGATGCTGTTCTTGACGAGAATGTTACCAATGACGAAGTATATCGAGTTACAGTTGAACCAATAATTCCTACAATTTTTGAGAGAACCAAAGCTACTTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATACACAATGCAACCGTTGCCGCTCAGAGCTGCTGAAGACCTTGTTAGACAGTTGCATCGACCAGCATATCGAAACCAGAGATTTAAATTGTGGCTTAGCTACTTCGAGATATATGGTGGAAAACTTTTTGATCTTCTTAGTGAAAGAAAAAAACTCTGCATGAGAGAAGATGGACGGCAGCAAGTGTGTATTGTAGGACTGCAAGAATTTGAAGTGTCTGATGTACAGATTGTCAAAGAATTCATTGAAAAGGGGAATGCATCCAGAAGTACGGGGTCAACTGGTGCAAATGAGGAGTCCTCCAGGTCCCATGCTATCTTGCAACTGGTTGTAAAGAGGCACAATGAGATAAAAGAGAGTAAGCGGAACAATAATGATGGAAATGAGGCAAAAAGTGGGAAGGTTGTGGGGAAGATATCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGATACTACTGACAATGACCGTCAAACAAGGATCGAAGGTGCTGAAATCAACAAGAGTCTTTTGGCTTTGAAGGAGTGCATCCGTGCTTTGGACAATGATCAGATCCATATTCCTTTTCGGGGAAGCAAACTTACGGAAGTGCTCCGTGACTCCTTTGTTGGAAATTCAAAAACTGTTATGATCTCTTGTATATCCCCAAATGCTGGGTCTTGTGAACACACACTTAATACCTTGAGATATGCAGACCGAGTTAAAAGTCTATCCAAGAGTGGAAATCCTCGGAAGGACCAGGCCCCAAATCCAGTTCCACCAGTCAATAAAGAGGCTTCACCCACATCTTCACTTCTTGCTAGCATGGGTACAGAGGATTTTAATGGTCAGCGTCAAGAGATAAAAGCAACGGACTTGGGCAGAAAAGCTGTAGAAAAGGAAAGTTCTTTCTACAGCTCTTCCACTGATGTTGACAAACAACTATCAAGTTTCTCTTCTAGTTATTCATACAATGGGCGAGAAGATAAAAGCCTGGCTTCTGCTCCAATGGACAGGGAAAGGTTTGAAGTAAAGAATTCTTACGGTGATTCTACCAATCAAAAGATGAACTCTTATTCCCTAAATGTTACAGATGAGAAAGTGCAAAGGGTGTCTCCTCCACGCAGAAAAGGAACTAAGGAGGAGAAACCCGAAAGATCTATAAATTGGGTAAAAAGGGATTCCAATGGTTCTAATAACACCACAAGCTCCAAGCAGCAGAACACAGGAAATTATAACACAGTTAGCACTGGATCGGGGCAGTCTGAAACAGAATCCTCTTCTGACGTGAATATCAGCGCAATACTTCAGGAGGAAGAAGCACTAATTGCTGCTCATAGGAAAGAAATTGAGGACACAATGGAGATTGTTCGTGAAGAAATGAAACTATTGGCAGAAGTGGACCAGCCAGGAAGTCTAATTGACAACTATGTAACTCAGTTGAGTTTTGTGCTTTCTCGCAAAGCAGCTAGCCTGGTGAGTCTTCAAGCTCGCCTCGCAAGGTTCCAACATCGACTAAAAGAACAAGAGATACTGAGTAGAAAAAGAGTACCCCGTTAA 2448 0.4363 MGGQMQQSNAAATALYDHAGAGSLHNAAGPATDAGDAVMARWLQSAGLQHLASPLASTGIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPYTPTSQNLSGATVSDGFYSPDFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGGARAFEDDFNPISRKQERGEADVGASVFVPTNEKENNTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTAYDSAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDENVTNDEVYRVTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHRPAYRNQRFKLWLSYFEIYGGKLFDLLSERKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNASRSTGSTGANEESSRSHAILQLVVKRHNEIKESKRNNNDGNEAKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPRKDQAPNPVPPVNKEASPTSSLLASMGTEDFNGQRQEIKATDLGRKAVEKESSFYSSSTDVDKQLSSFSSSYSYNGREDKSLASAPMDRERFEVKNSYGDSTNQKMNSYSLNVTDEKVQRVSPPRRKGTKEEKPERSINWVKRDSNGSNNTTSSKQQNTGNYNTVSTGSGQSETESSSDVNISAILQEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVSLQARLARFQHRLKEQEILSRKRVPR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00280 815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 540 IPR027417 -
Vian1g00280 815 ProSiteProfiles Kinesin motor domain profile. 205 540 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g00280 815 MobiDBLite consensus disorder prediction 665 686 - -
Vian1g00280 815 MobiDBLite consensus disorder prediction 687 724 - -
Vian1g00280 815 MobiDBLite consensus disorder prediction 628 642 - -
Vian1g00280 815 CDD KISc_KIF2_like 205 538 - -
Vian1g00280 815 Pfam Kinesin motor domain 211 539 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g00280 815 ProSitePatterns Kinesin motor domain signature. 439 450 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vian1g00280 815 PANTHER KINESIN-RELATED PROTEIN 6 32 813 IPR027640 GO:0003777|GO:0007018
Vian1g00280 815 Coils Coil 788 808 - -
Vian1g00280 815 MobiDBLite consensus disorder prediction 540 565 - -
Vian1g00280 815 MobiDBLite consensus disorder prediction 614 724 - -
Vian1g00280 815 SMART kinesin_4 203 546 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g00280 815 FunFam Kinesin-like protein 185 543 - -
Vian1g00280 815 PRINTS Kinesin heavy chain signature 490 511 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g00280 815 PRINTS Kinesin heavy chain signature 396 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g00280 815 PRINTS Kinesin heavy chain signature 286 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g00280 815 PRINTS Kinesin heavy chain signature 440 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g00280 815 Gene3D Kinesin motor domain 185 543 IPR036961 -
Vian1g00280 815 Coils Coil 732 763 - -
Vian1g00280 815 MobiDBLite consensus disorder prediction 643 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00280 Vian-Chr1 2471399 2479343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00280 197 540 Calmodulin-binding Proteins AT5G65930 34.463 6.04e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00280 K10393 - gmx:100778915 1443.33