Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00277 ATGGAAGAGCCTCAGTATCGGGAGCATCCAAAACCCAAAATCGCAGCCAGTCCGCCGCCGCAGCACTCCGATGGGGCCTCGGCAGAGTTGCGCGGAGTGGATTGCAACCTCGCTTCCCTCTGCGAGCATGTCCAAATCGAAGGCTTCAATTCGGGTTCCTTTTCCGACATCGTCGTCAATGCAATGGGTTCCACTTATCACCTTCATCGGCTTATCCTCTCGCGCAGTTCCTATTTCAGGAACATGCTTCACGGGCCTTGGAAAGAAGCCAGTGCTCCTGTTGTGACTCTGCATGTTGATGATAAAAATGTTAATGATGAGGCAATTGCAATGGCTTTGGCGTACCTATACGGCCACCACCCTAAGCTTAATGATAATAATGCATTTCGTGTTCTTGCTGCTGCATCCTTTCTCGACCTTCAGGATTTGTGTGGAATTTGTACAGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCGGAGAACCAAGACTATGGCATTCATGGGGAGCGTGTTAGAACTGCTTGCTGGGGTTACCTTTGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCTAAACTTTCATCGCAAACATTACATGCATTATTGACTTCTAATGATCTATGGATACCCAATGAAGAGAAACGGTTTGAATTGGCTTTGCACACATTCCTGGCAAAAGGTGCTCATTGCAAGGTTGAACATCCTTCGCATGGAATTTCTGGTTCTGAGTCTGCTACTGGTATTCATGCTGATTCTATTAACAGCAAGGGAAAAAGTATAATTGATGGCTGCACTACTAAGAGGTTGGAAACTGACCTTGGGAAAATGAATCTTAATAGTGATCTAAAGGACCCAAGCACTTCAAGTGTTCTAGTTGAGCTTGCAGATCCAGTGGCAGACTTCAATGATGGTGTTTCTGTTTCCGACGAACAGGTTCAACAAGCTTCATATGTCCGTACACCAAACCTGAATCCAAGATATTCTGGTGACATGGAAGGACCAACATTGGGTAATTCGATGCCTGATAAAGATGTGATGAGAACATCATGCTATGTGAACATGCCTCTTGGTACTGAAGCTACTGCTATGGCAGCCCCTGGAGTGGTCATTGAAGGGCCGTCGGAAGAAGGACCTTGCTACCAGTTGGAGGACAATAGTTGGTTTGTTAGGGACCCATCAAGACATTGTTTTTCATCAAATTCTTGTAATGAGCTCACGTCCAGTGATTGGGGAAGATATGGAACACCATTGTTTTCATGGAATGGCCAAGTTGTTGGCAGAAGACAGCTTAAAGCTCACCCCAGAGCAAACTACAGAGATCATGGAGATGAATATGATGCATTTTTCAATATATTTGAAGGGGGGTCCCTTTTATATTGCAATATGTCTTTTGATGCGCTTCTAAATGTCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTTCAGATGCTTCTTAGTCAGAGAGTACAGGAAATTGCCGCTGATACCTGCAAAGTTTGCTCCCTCATGAATTGTACTTGTCAGAAGCAATTTGCATTTTCACATGGAGCTTCTACATCTGGATCTTACTTGCAAGAACATAATCAGAACATTATGCCTGGCAGTGTGGGAAATATATATGTTGCTGAATCTTCTGCAGGTGAAAGAAGTGGCCTTTTTAGACCTGTACGAGTGCATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGCCGTGGAACTAATTTTGTTCCGGCATCTGCTTCACATCCTACACGTTTCGTCTTTTCTCGTGTACCATTAGGTGTTGGAAACAGAAACCATCCTCAGTCTGCAGCCAATGATGATTCAGATACACGTGCTGACCCAAATGGAGACCTGTCTGGTGATGGATTGACAGCTGTAGTTGGGTTAAGCCTTGGAGGGAGTAATGGAACAAATGTACATACAGAGCTAACACAAAGGGGATATGAAATGGGCATGCAAAGCAGCATGTCTGGAAGTAATGCTGGAGATGCAAGTACTGGTGGTATCCCCATGCAGATGTTAGAGACACCAGAACATACCATTGGTATAGAATGGGACAATGTCAACAGTGCTTCCATATCACTGGATATGAAAACACCTTTAAGCCATTTCCCCCCTTTTCGCTTTGGTGTACGTTTTGAGGATGTGCATAGGCTTGGTGATGGTCAGGTCAAGCATTCTACAGAAGTTTTCTACGCTGGTTCTTTGTGGAAGGTCAGTGTACAAGCTTTTAATGATGAAGACCCCCAGGGACGGCGAACCCTTGGGCTGTTTCTTCATCGTCGAAAAGCAGAGATAACCGATATACATAGAAAGGTGCACATGTATGTTGACTCACGTGAAAAGGTGACTGCACGCTACCAGTTGTCTGTCCCATCCAAGAGGGAAATGATGGTGTTTGGAAGCTTTAAACAAACAGGCACACTTCTACCTAAATATCCCAAGGGATGGGGTTGGCGAACTGCTCTGCTATTTGATGAGCTTGCCGATCTTCTCCAAAACGGTGCCCTAAGGGTAATTGCTGTAGTGCAGCTTGTATGA 2601 0.4471 MEEPQYREHPKPKIAASPPPQHSDGASAELRGVDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPVVTLHVDDKNVNDEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCGICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELKEVLPKLSSQTLHALLTSNDLWIPNEEKRFELALHTFLAKGAHCKVEHPSHGISGSESATGIHADSINSKGKSIIDGCTTKRLETDLGKMNLNSDLKDPSTSSVLVELADPVADFNDGVSVSDEQVQQASYVRTPNLNPRYSGDMEGPTLGNSMPDKDVMRTSCYVNMPLGTEATAMAAPGVVIEGPSEEGPCYQLEDNSWFVRDPSRHCFSSNSCNELTSSDWGRYGTPLFSWNGQVVGRRQLKAHPRANYRDHGDEYDAFFNIFEGGSLLYCNMSFDALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKVCSLMNCTCQKQFAFSHGASTSGSYLQEHNQNIMPGSVGNIYVAESSAGERSGLFRPVRVHVRGAIDGLAGIGRGTNFVPASASHPTRFVFSRVPLGVGNRNHPQSAANDDSDTRADPNGDLSGDGLTAVVGLSLGGSNGTNVHTELTQRGYEMGMQSSMSGSNAGDASTGGIPMQMLETPEHTIGIEWDNVNSASISLDMKTPLSHFPPFRFGVRFEDVHRLGDGQVKHSTEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDIHRKVHMYVDSREKVTARYQLSVPSKREMMVFGSFKQTGTLLPKYPKGWGWRTALLFDELADLLQNGALRVIAVVQLV 866
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00277 866 SMART BTB_4 55 155 IPR000210 GO:0005515
Vian1g00277 866 Gene3D Potassium Channel Kv1.1; Chain A 29 188 IPR011333 -
Vian1g00277 866 MobiDBLite consensus disorder prediction 1 27 - -
Vian1g00277 866 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 14 866 - -
Vian1g00277 866 Pfam BTB/POZ domain 49 153 IPR000210 GO:0005515
Vian1g00277 866 SUPERFAMILY POZ domain 49 153 IPR011333 -
Vian1g00277 866 ProSiteProfiles BTB domain profile. 55 125 IPR000210 GO:0005515
Vian1g00277 866 MobiDBLite consensus disorder prediction 616 640 - -
Vian1g00277 866 MobiDBLite consensus disorder prediction 330 351 - -
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vian1g00277 BTB 9.2e-14 CL0033
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00277 - - gmx:100806711 1612.82