Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00273 ATGGAGGATTCCTCAGAGAAAAAATGGAAGCACCGAGAGTTCACTTTAGCATCAGTTTCCGACTTATCTGTCGTTCCTCCTTCCGCTTTGCCGGGAACCGCTCGCTTCGACTCTGACGGTCTCCAAATTCATCAGCAATCTCATCAGATTCCACTCAATATCGATCCTCGAACTGTTCAGTTATTCAGACTGAGTTCTGTTCACTCCCTTTGCGTGGTGGAAGGACCTGATGCCGGTAAAAAGGCATCTTATTCCAGGGGAGTCAATATCCAGTTTAAAAACGAAGAGGAGAGTGAAGCCTTCCATTGTGTAGTCCAACAATGGAAGAAGGAAATCAATGCTCAAGGAACAAATGGGCGAAATCAATCAAATATAACTTCTAAAAGCAAATTTGATGAGAAAATAGAGTCATCATCTGCCAAAATGTATTTTCATTACTACGGACAACTTCTGCATCAGCAAAATATGTTACAGGACTATGTGCGGACAGGAACCTATCATGCTGCTGTTATTGAGAACCGGTCTGATTTCGCTGGTCGTGTTGTAGTTGATGTGGGTGCTGGTAGTGGTATTTTATCACTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGAAATCCAATGCTAGCTCAACGAATTACAGTGATCAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATATCTGAGCCCATGGGAACCTTGTTAATCAATGAAAGAATGTTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTTGTTCCTACGGGAAAAATGTTTCCAGCTCTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATTTGTTTATAGAAATTGCTAATAAGGCACTGTTTTGGCAGCAACAGAACTATTATGGTGTTGATTTAACACCCCTACATGGGACTGCATTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGACTGTTAATAGCTCCTTCAATATCCCATGTGATAGACTTCACCAAAATAAAGGAGGAAGAACTGTATGAAATTGATATTCCTCTGAGATTCATAGCCTCTGTGGGCACCAGAGTTCATGGCTTAGCTTGTTGGTTTGATGTGCTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGGTCACCGACAACCCATTGGTACCAGTTACGTTGTGTTCTCTCACAGCCAATATACGTCATGGCTGGACAAGAAATTACTGGCAGGCTTCACTTGATTGCCCACAATGCACAGAGTTATACAATTTATTTAACATTGTCAGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGGGGAATTCTCCAAACATCTTCCTGTAAACTTGATCTGAAAGAACCCTATTATAGAATGTCTCAACCACAGGCTTATGCATTAGCTCAAGATCAACAATCTCAACCACTTATATCAACGCAGGATTTAGATGAACCTGAATTTGTACAACAGCCTTCGCCTAATTCATGTGTCCAGATTGATCCACTGATGCAGAATATATAA 1587 0.419 MEDSSEKKWKHREFTLASVSDLSVVPPSALPGTARFDSDGLQIHQQSHQIPLNIDPRTVQLFRLSSVHSLCVVEGPDAGKKASYSRGVNIQFKNEEESEAFHCVVQQWKKEINAQGTNGRNQSNITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYHAAVIENRSDFAGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPMLAQRITVIKGKVEDVELPEKADILISEPMGTLLINERMLESYVIARDRFLVPTGKMFPALGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPSISHVIDFTKIKEEELYEIDIPLRFIASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYALAQDQQSQPLISTQDLDEPEFVQQPSPNSCVQIDPLMQNI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00273 528 Gene3D - 285 493 - -
Vian1g00273 528 CDD AdoMet_MTases 182 253 - -
Vian1g00273 528 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Vian1g00273 528 FunFam Probable histone-arginine methyltransferase CARM1 123 283 - -
Vian1g00273 528 Pfam Ribosomal protein L11 methyltransferase (PrmA) 178 252 - -
Vian1g00273 528 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 457 IPR029063 -
Vian1g00273 528 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 94 466 IPR025799 GO:0016274|GO:0018216
Vian1g00273 528 Gene3D Vaccinia Virus protein VP39 121 283 IPR029063 -
Vian1g00273 528 FunFam Probable histone-arginine methyltransferase CARM1 285 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00273 Vian-Chr1 2408643 2414574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00273 143 432 C2H2 Transcription Factor Family AT3G12270 33.766 3.98e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00273 K05931 - gmx:100780736 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00273 1 2408643 2414574 Vian4g00136 4 1263947 1271002 PCT