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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vian1g00271
ATGCAGAACGAGGAGGGGAAACTCACTGAGTTATACGTTCCTAGAAAATGCTCTGCCACTAACAGACTCATAACTGCAAAGGACCATGCCTCGGTTCAGATGAACATTGGCCATTTGGATGAGAATGGTATCTACAATGGTCATTTTTCCACTTTTGCTCTCTGTGGTTTCGTTCGAGCACAGGGTGAGGCTGACAGTGCACTAGATAGGTTGTGGCAGAAGAAGAAGACAGAAGTTAAACAACACTAG
249
0.4498
MQNEEGKLTELYVPRKCSATNRLITAKDHASVQMNIGHLDENGIYNGHFSTFALCGFVRAQGEADSALDRLWQKKKTEVKQH
82
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vian1g00271
82
Pfam
Ribosomal protein S21e
1
76
IPR001931
GO:0003735|GO:0005840|GO:0006412
Vian1g00271
82
PANTHER
40S RIBOSOMAL PROTEIN S21
1
80
IPR001931
GO:0003735|GO:0005840|GO:0006412
Vian1g00271
82
PIRSF
RPS21e
1
82
IPR001931
GO:0003735|GO:0005840|GO:0006412
Vian1g00271
82
FunFam
40S ribosomal protein S21
1
81
-
-
Vian1g00271
82
Gene3D
-
1
81
IPR038579
-
Vian1g00271
82
ProSitePatterns
Ribosomal protein S21e signature.
11
19
IPR018279
GO:0003735|GO:0005840|GO:0006412
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vian1g00271
Vian-Chr1
2390466
2391511
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vian1g00271
1
82
Cytoplasmic Ribosomal Protein Gene Family
AT5G27700
80.488
2.59e-50
151
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vian1g00271
K02971
-
gmx:100817753
159.844
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