Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00248 ATGATGGCCAAAATGACTGTGAATAAAGCCAAGTGGGTTGACAAGGTTGAGGTTTTTAAGAAGTGGGGGCGGTCGGAGGAGCATATGCTTGTGGCGTTTAAGAAGCATCCTCATTGCATGATGAACTCCCGTGAGAAGATTGATGCCGTATTTAGCTTCTGGGTTGAGGTGTTAGGGTATAGCTCTTTGGAGATTGTCAAGTATCCTGTTATTTTTCAGATGAGTCTTCCTAAGAGGATTGTTCCGAGGTCTTTGGTTCTGAGGTTTCTTGACAAGGAAGGATTGAGGAAAAAGGGTGCAAGCTATGGCTCGCCTCTCCTCCGGACGGAGAATGTGTTCCTGAAGAAGTTTGTCTATGGTTTTGAAAAGCATTCTTCTCAGTTGTTGAAGATATATGAGAAAAGTATGAACCAAGGGAATACTACAGACCAGGAAAAACTTGCTAGTTTGAAGAAAAATATGGTTTTTCGGTGGTGGTTGTGTATGGAGGTTAGTGGTGACGTTTTCCAGTGGCTGCTTTGGACGGAAAAACTTGCGATTTCTGGTTGGTTCGAGGAAGAAGATGGTTTTGCGATGCTGGTGGTTGTGTGGTAG 594 0.4394 MMAKMTVNKAKWVDKVEVFKKWGRSEEHMLVAFKKHPHCMMNSREKIDAVFSFWVEVLGYSSLEIVKYPVIFQMSLPKRIVPRSLVLRFLDKEGLRKKGASYGSPLLRTENVFLKKFVYGFEKHSSQLLKIYEKSMNQGNTTDQEKLASLKKNMVFRWWLCMEVSGDVFQWLLWTEKLAISGWFEEEDGFAMLVVVW 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00248 197 PANTHER CGI-12 PROTEIN-RELATED 3 119 IPR003690 GO:0003690|GO:0006355
Vian1g00248 197 Pfam mTERF 6 96 IPR003690 GO:0003690|GO:0006355
Vian1g00248 197 Gene3D Transcription termination factor 3, mitochondrial 2 126 IPR038538 -
Vian1g00248 197 SMART mt_12 62 96 IPR003690 GO:0003690|GO:0006355
Vian1g00248 197 SMART mt_12 30 61 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00248 Vian-Chr1 2153354 2154413 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vian1g00248 mTERF 4.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00248 K15032 - gmx:100788877 159.458