Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00222 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGAACATTGCTGAAAAGAAGATGGAAAACAGGGATTTTGCAGGGGCTCGTAAAATTGCTCTTAAGGCTCAGCAGCTGTACCCTGATCTGGAAAATATTGCTCAAATGCTTGTTGTCTGTGATGTGCACTGCTGTGCTGAGAATAAATTGTATGGTAATGAAATAGATTGGTATGAAATTCTTCAGGTTGAACAGACAGCTGTTGATGCACTAATTAAGAAGCAATATAGAAAGTTTGCCCTCCTACTCCATCCTGACAAAAACAAGTTTGCTGGTGCTGAAGCCGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTACTTCTGGACAGAGAAAAACGTATTGTTTTTGACATGAAGCGTAGAGTTCCGAAGAACAAACCTGCTACATCACATTTTAATACTACTGCAGGGAGGAATGTTAGGTCTAATTTTACAAGCTCAACTTCTCAGCAGCAGCAGCAGCAGCAAAATGGTGCACGAGATACATTTTGGACAGTCTGCCCATTTTGTTCTGTTAAGTATCAATATTACAAAGAAATTTTAAAGAAATCTCTTCGCTGTCAACAATGTAACAGGCCCTTTGTTGCATATGAAGTGGAAAAACAAGGTACACCATCTCCTGCAACTAATTCAACTCAGCAAGCTTCTGACCAGCAGAAAGGTGGTTTGAATCATGGTGCTTTCAAGGTAGGTGCTGAATCTCAAAGCAATTCACATGCTAAGAAATCCAATATAGGGTCATCTCCGGCATCTAATTCAACCCAGCAAGCTTCTGACCAGCAGAAAGGTGGTTTGAATCATGGTGCTTTCAAGGTAGGTGCTGGATCTCAAAGCAATTCACATGCTGAGAAGTCCAATATGGGGTCATCTGATAAAAAGTTACCTGCTAGTGTTTCTCGAAAACATAATGGAAAGAGAAAAAAGAAGCAGGTGGCAGAATCCAGTGAAAGTTCTGTTCCTTTGATCCACAGTGATTCTGAAGAAGATGGAGTTGCTGGAAAGGATGGTTATTCCAAAGTAGAAAACCATTCAACTACTAGAGAAGGGCATCTACGCAGATCTACCCGGAAAAGGCATCAGGTTTCCTACAAGGAGAATTTGAACAGCACTGATGATGGTGAGAAAAGTAAAATGAATGACCCTAATGATTTACCTGCTGCGCACAAAGAAGTAAATCAGAAAAAGCACCTGTATTCAGGAAGAAATGAGGAAACTAACACATTTAAGGGAAAAGATGTGGTGGGAGGGGCAAAGCAGTTGGATGAAACCTCAGAGCATTCTCCAAATTCAACCTCTAAAGTATCAAATCAACCAAATGTTTATGCCTTCCTTGATGCAGAGTTCAGTGATTTTGACAAGGACAAGAGAAAAGAATGTTTTGCTGCTGGGCAGATTTGGGCTGTTTATGACTCAGCAGAAGGTATGCCTAGATTCTATGCTTTAATCAGGAAAGTTCTATCTCCTGGATTCAAACTGCGGTTAACATGGTTCGAATCACATCCAGACTGGAAGGATGAAATGAACTGGGTGAACGAGGAATTGCCTGTTGCGTGTGGGAAATATAAACTTGGTGACACTGATGTCACGGAAGATCATCTGATGTTCTCTCATCTGGTTTTGTGTGAAAAAATTAGCCGCACTACTTTTAAAGTGTATCCTAGAAAGGGAGAAACTTGGGCCCTTTTTAAAAATTGGGATATTAAATGGTACATGGATGCGAAATCTCACCAGCTGTATGAATATGAGTTTGTTGAAATCTTGACAGATTATGTTGAAGATGAGGGTGTATATGTTGTCTACTTGACTAAGTTGAAAGGTTTTGTAAGTATCTTCCTTCAAAATATAAAGGAATCTAAAAAATCATTTCAAATTCCACCACGGGAGTTATTTAAATTCTCTCACAGGGTTCCATCTTTCAAAATGACTGGTGAGGAAAGGGCTGGTGTACCCTCAGGATCTTATGAACTTGATCCTGGAGCTTTGCCAGCACATTTTGAAGAGAAGGTTGGTGACGGCTCATCTGGCTGTGAGAATACAGGCACTTCAGATAGATCAGAATCCCTGATGTCTGAGGGAGGTAGGTCCACTCCCGAGGTTAATGGCAGCAATGATTGGTGTGCTTCTCTGGTACTAGAAACAATTGAAATTCCAGATACTCATTTCTTTAATTTTGACGCCGGGAGATCCCTTGAGAAGTTTCAGATTGGTCAAATTTGGGCATTTTACAGTGACGAGGATGGATTGCCAAAATATTACGGTCGCATTAATAAGATTGTGACTAGTCCTGATCTTGAATTGCATGTTTCCTGGCTTACTTGCTACTGGCTACCAGAGAACACCACTGAATGGGAGGACAAAGATATGGGTGTGCTTATTTCATGCGGTCGATATAACTTTAATAAAACAGATGAATTTTTCAGTATTTTTAATACAACCTCTTGTGTTTCACATCAAGTGCATGCTGAATCTGTTGGAAAGAATACAAATACAAAATATGCGATCTTTCCGAGGAAAGGTGAAGTTTGGGCGTTATATAGAAAATGGACAAATAAAATGAAGTGTTCTGAGTTGAAAAATTGGGAGTATGACATAGTGGAAGTTATCGAAGAAACTGATTTGTTCATTATTGTCTTAGTTCTGGAGTTTGTCAGTGGGTTTAATTCCGTTTTCAGAGGCAAATCAAATGAAAGATCATCTGGCAAGCTGAGAATACCAAGAAAAGAGTTGCTTAGGTTCTCCCACCAAATCCCAGCTTTCAAACTGACAGAAGAGCATGGCAATCTCAGAGATTTCTGGGAACTTGATCCCGGTGCTCTACCAACACACTATTTTGGCTTGAGATGA 2877 0.4025 MDCNKEEALRAKNIAEKKMENRDFAGARKIALKAQQLYPDLENIAQMLVVCDVHCCAENKLYGNEIDWYEILQVEQTAVDALIKKQYRKFALLLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRIVFDMKRRVPKNKPATSHFNTTAGRNVRSNFTSSTSQQQQQQQNGARDTFWTVCPFCSVKYQYYKEILKKSLRCQQCNRPFVAYEVEKQGTPSPATNSTQQASDQQKGGLNHGAFKVGAESQSNSHAKKSNIGSSPASNSTQQASDQQKGGLNHGAFKVGAGSQSNSHAEKSNMGSSDKKLPASVSRKHNGKRKKKQVAESSESSVPLIHSDSEEDGVAGKDGYSKVENHSTTREGHLRRSTRKRHQVSYKENLNSTDDGEKSKMNDPNDLPAAHKEVNQKKHLYSGRNEETNTFKGKDVVGGAKQLDETSEHSPNSTSKVSNQPNVYAFLDAEFSDFDKDKRKECFAAGQIWAVYDSAEGMPRFYALIRKVLSPGFKLRLTWFESHPDWKDEMNWVNEELPVACGKYKLGDTDVTEDHLMFSHLVLCEKISRTTFKVYPRKGETWALFKNWDIKWYMDAKSHQLYEYEFVEILTDYVEDEGVYVVYLTKLKGFVSIFLQNIKESKKSFQIPPRELFKFSHRVPSFKMTGEERAGVPSGSYELDPGALPAHFEEKVGDGSSGCENTGTSDRSESLMSEGGRSTPEVNGSNDWCASLVLETIEIPDTHFFNFDAGRSLEKFQIGQIWAFYSDEDGLPKYYGRINKIVTSPDLELHVSWLTCYWLPENTTEWEDKDMGVLISCGRYNFNKTDEFFSIFNTTSCVSHQVHAESVGKNTNTKYAIFPRKGEVWALYRKWTNKMKCSELKNWEYDIVEVIEETDLFIIVLVLEFVSGFNSVFRGKSNERSSGKLRIPRKELLRFSHQIPAFKLTEEHGNLRDFWELDPGALPTHYFGLR 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00222 958 SUPERFAMILY Chaperone J-domain 60 131 IPR036869 -
Vian1g00222 958 MobiDBLite consensus disorder prediction 136 168 - -
Vian1g00222 958 Pfam DnaJ domain 67 128 IPR001623 -
Vian1g00222 958 MobiDBLite consensus disorder prediction 241 274 - -
Vian1g00222 958 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 951 - -
Vian1g00222 958 MobiDBLite consensus disorder prediction 338 360 - -
Vian1g00222 958 MobiDBLite consensus disorder prediction 138 168 - -
Vian1g00222 958 Pfam Domain of unknown function (DUF3444) 452 656 IPR024593 -
Vian1g00222 958 Pfam Domain of unknown function (DUF3444) 724 935 IPR024593 -
Vian1g00222 958 Gene3D DnaJ domain 64 173 IPR036869 -
Vian1g00222 958 PRINTS DnaJ domain signature 87 102 IPR001623 -
Vian1g00222 958 PRINTS DnaJ domain signature 103 123 IPR001623 -
Vian1g00222 958 PRINTS DnaJ domain signature 69 87 IPR001623 -
Vian1g00222 958 MobiDBLite consensus disorder prediction 371 401 - -
Vian1g00222 958 MobiDBLite consensus disorder prediction 685 710 - -
Vian1g00222 958 CDD DnaJ 67 120 IPR001623 -
Vian1g00222 958 MobiDBLite consensus disorder prediction 214 232 - -
Vian1g00222 958 MobiDBLite consensus disorder prediction 283 304 - -
Vian1g00222 958 MobiDBLite consensus disorder prediction 212 401 - -
Vian1g00222 958 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Vian1g00222 958 SMART dnaj_3 66 123 IPR001623 -
Vian1g00222 958 MobiDBLite consensus disorder prediction 678 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00222 Vian-Chr1 1924686 1927562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00222 4 212 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.279 2.06e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00222 - - vun:114177826 1672.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00222 1 1924686 1927562 Vian6g01515 6 32770162 32773053 PCT