Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00195 ATGGCATCTCCTCCTCCTCCCCCCGATCCTCCCTCCGCCGTCCCTCTAGCCCTCATCCCCCTTCCCCTCCCCGCGCCTACCTCCTCCCGTCGCCTTCCTCCTCCCTGCTGGTCACCCGATGAGACCCTCGCCCTCATCGACGCCTACCGCGACAAGTGGTATTCCCTCGGCCGCGGCAACCTCAAGGCCACCCACTGGCAAGAGGTCGCCGACGCCGTCGCCAACCGCTGCCCCAACGCCTCCCCTCCCAAAACCCCCGTCCAGTGCCGCCACAAAATGGAGAAGCTCCGCAAGCGCTACCGCACCGAGATCCAGCGCGCTCGCTCCCTCCCCGTTTCCCGATTCAACTCCTCCTGGGTTCACTTTAAGCTCATGGACTCCATGGAGAAAGGTCCCTCTCCTGTCAAACCCGAACACGATTCCGATAGTGACAACGATGACGACGACAACGACGATGATCAAGATCTGTACCAAGAGATCAACCAGAACGGCCACACTCGAAGCTTGAACAGGTTGTACAGGAATGGGTTTCCGGGTTCCGGTGCCGGTGGGTTTAGAATTCGAATTCCCACCGGGATGCCCCCTGCTCAACCCGGGTCTGGCTCCAAGATTTTTGGGAAGGTTGGGAATCAGAAATTCAGCCCTAATTTGAATCAAAACCCTAGCCCTAATTCTAATTTCGGGAAGAAGAGAGAGAGAGACCCGGTTGGGGAGGTGGTGGCTGCTATTAAGGTTTTAGGAGATGGATTTGTGAGGATGGAACATATGAAGATGGAGATGGCGAGGGAGATGGAAACTATGCGCATGGAGATGGAAATGAAACGCACTGAGATGATTCTGGAGTCACAACAACGCATTGTTGAGGCCTTTGCCAAGGCAGTTTCAGAAAAGAAGAAGGCCAAGACTGTGTCTTCCCCTCAGCAGCCCTAA 930 0.5624 MASPPPPPDPPSAVPLALIPLPLPAPTSSRRLPPPCWSPDETLALIDAYRDKWYSLGRGNLKATHWQEVADAVANRCPNASPPKTPVQCRHKMEKLRKRYRTEIQRARSLPVSRFNSSWVHFKLMDSMEKGPSPVKPEHDSDSDNDDDDNDDDQDLYQEINQNGHTRSLNRLYRNGFPGSGAGGFRIRIPTGMPPAQPGSGSKIFGKVGNQKFSPNLNQNPSPNSNFGKKRERDPVGEVVAAIKVLGDGFVRMEHMKMEMAREMETMRMEMEMKRTEMILESQQRIVEAFAKAVSEKKKAKTVSSPQQP 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00195 309 ProSiteProfiles Myb-like domain profile. 37 97 IPR001005 -
Vian1g00195 309 MobiDBLite consensus disorder prediction 142 156 - -
Vian1g00195 309 SMART 118neu2 44 133 IPR006578 -
Vian1g00195 309 Coils Coil 90 110 - -
Vian1g00195 309 Pfam Myb/SANT-like DNA-binding domain 35 128 IPR044822 -
Vian1g00195 309 Gene3D - 37 102 - -
Vian1g00195 309 MobiDBLite consensus disorder prediction 128 156 - -
Vian1g00195 309 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 296 IPR044823 -
Vian1g00195 309 FunFam Trihelix transcription factor ASIL2 37 102 - -
Vian1g00195 309 MobiDBLite consensus disorder prediction 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00195 Vian-Chr1 1707526 1708455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00195 11 128 Trihelix Transcription Factor Family AT3G14180 33.600 2.31e-18 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vian1g00195 Myb_DNA-bind_4 2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00195 - - vun:114179736 522.702