Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00141 ATGCGCAAGTTGAGGCAAATATGTCAAACAGGGTTAGGAATTAGCCTGCGACTGAGCTTTGTAGGTGGTACTGACATGGAGGCCACTGAGAACAAGCTGAAGCTGTATTCACACTGGATAAGCTCCTGTTCCTTCCGAGTCCGATTTGCTCTCAACCTCAAAGGACTACCTTACGATTATCAAATAGTCACCACATTTTCTGAGCCCGAGTTTCTCAAGCTCAACCCTATTGGATTTGTCCCTGTGCTGGTGGATGGCGATTCAGTAATTGCTGACTCTTTTGCCATTATTATGTACTTGGAGGATAAGTATCCTCACCCTCCTTTGCTTCCTCATGACATTCTCAAAAGAGCAATCAATTTCCAGGCTGTCACCATTGTTTCCTCATCTATACAACCTTTTCAAAACTATACTGTTGTGCATTTGCAGAAGTATATAGGGGAAAAAATCGGCCCTGATGAAAAACTTCCTTGGACCCAACGTGTAATAGGAAAAGGCTTTACGGCACTTGAAAAACTGTTGAAAAACCATGCAGGAAGATATGCAACTGGAGATGAAATTTTCCTGGCAGATATGTTTTTAGCACCTCAGTTAGATGCAGCAATTAGGAGATTCAACGTTGACATGAAGGAATTCCCTACTCTATCAAGATTACATGAGGCATATAATGAAATCCCAGCATTTCGAGAGGCTTTGCCAGAGAACCAACCAGATGCAGTTCATTAG 726 0.4242 MRKLRQICQTGLGISLRLSFVGGTDMEATENKLKLYSHWISSCSFRVRFALNLKGLPYDYQIVTTFSEPEFLKLNPIGFVPVLVDGDSVIADSFAIIMYLEDKYPHPPLLPHDILKRAINFQAVTIVSSSIQPFQNYTVVHLQKYIGEKIGPDEKLPWTQRVIGKGFTALEKLLKNHAGRYATGDEIFLADMFLAPQLDAAIRRFNVDMKEFPTLSRLHEAYNEIPAFREALPENQPDAVH 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00141 241 SFLD Main (cytGST) 33 222 - -
Vian1g00141 241 Pfam Glutathione S-transferase, C-terminal domain 157 229 IPR004046 -
Vian1g00141 241 Gene3D Glutaredoxin 30 111 - -
Vian1g00141 241 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 113 241 IPR010987 -
Vian1g00141 241 Pfam Glutathione S-transferase, N-terminal domain 35 108 IPR004045 -
Vian1g00141 241 PANTHER MALEYLACETOACETATE ISOMERASE 33 239 - -
Vian1g00141 241 FunFam Maleylacetoacetate isomerase 112 241 - -
Vian1g00141 241 SUPERFAMILY GST C-terminal domain-like 108 239 IPR036282 -
Vian1g00141 241 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 31 108 IPR004045 -
Vian1g00141 241 CDD GST_C_Zeta 116 236 IPR034330 -
Vian1g00141 241 SFLD Glutathione Transferase (cytosolic) 33 222 IPR040079 -
Vian1g00141 241 SUPERFAMILY Thioredoxin-like 30 111 IPR036249 -
Vian1g00141 241 FunFam Zeta class glutathione transferase GSTZ1 31 110 - -
Vian1g00141 241 NCBIfam maleylacetoacetate isomerase 34 239 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vian1g00141 241 Gene3D - 112 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00141 Vian-Chr1 1265806 1269802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00141 30 238 Glutathione S-transferase Gene Family AT2G02380 59.624 5.84e-88 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00141 K01800 - gmx:100526991 357.066