Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00137 ATGACAGAGGGTAGCAATCCAATATCTCCGGTGGACGGCATGGACGTGACCGGCGGCAGCAAAGAGCAGCAGGCGGCGGGAGTGGGGATTCTCCTTCAAATAATGATGTTGGTTCTGTCTTTCGTGTTAGGTCACATCCTTCGTCGCAAGAAGATTTACGTTCTTCCCGAAGCCAGCGCTTCTCTTCTCATTGGCTTGCTCGTTGGTACACTCGCTAACATTTCTCATACTCAAACTAGTATCAGTCTCTCGCCTAAACCTTTTTTCTCTAATTTTGGAGCTATTGTCACGTTTGCTATATTCGGCACCTTTCTGGCTTCCATTGTGACGGGTGTCTTAGTTTATATTGGCGGATTGATGTACCTCATGTACAGATTACCTTTTGTTGAGTGTCTAATGTTTGGTGCACTGATATCCGCAACCGATCCTGTTACTGTTTTGTCCATATTTCAGGAGCTTGGCACAGACGTCAATCTTTATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCTATTTCTTTGTACAGGTCATATCTTGAAATTACTGATCTTTTTGTTCTTCAATTTAGTCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCGTATTTCTCGTACATGCTTGCTGAAGGTCTTGGACTGTCTGGTATTGTATCAATATTGTTCACAGGAATGGTCATGAAGCATTACACATATTCAAATTTGTCACGTAGTTCTCAAAGATTCGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCTGAGACATTTGTATATTCATTGGAATTGCAAGGGCAGCCAATGTGTTCTCATGTGCTTATTTGGTCAACTTGTTCAGACCTACCCGCCGACAAATTCCGCGAAAACATCAGAAAGCACTTTGGACTTCGAGGGGCAATGGCTTTTGCCCTTGCTCTGCAATCAATTCATGATCTGCCAGATGGACATGGACAGATCATCTTAACTGCAACTACTGCAATAGTTGTTTTGACGGTATTACTGATTGGTGGTTCAACAGGCACCATGCTGGAAGCTTTACAAGTTGTAGGTAGTGACAGTCCTATCATCGAGAGTCCTTTGGCTTCAATTACCAGAACGAATTTTGAGGGAACCAATGGTTATCTTTCTCCCGAAGATGAAGAATCATCATCAGGGAACAAAATCAAGATGAGGCTACAAGAATTTCAAAGAAGTGCTGCATCTTTTACCGCATTAGATAAAAACTACCTCACCCCGTTCTTCACTAGTCAAAATGAAGATGAAGCTATGCCCCTGACTTTGGAGAACATGGGATTGGATGATGATGATGACCGCTACTCGTCATGA 1338 0.4238 MTEGSNPISPVDGMDVTGGSKEQQAAGVGILLQIMMLVLSFVLGHILRRKKIYVLPEASASLLIGLLVGTLANISHTQTSISLSPKPFFSNFGAIVTFAIFGTFLASIVTGVLVYIGGLMYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRSYLEITDLFVLQFSLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTYSNLSRSSQRFVSAFFELISSLAETFVYSLELQGQPMCSHVLIWSTCSDLPADKFRENIRKHFGLRGAMAFALALQSIHDLPDGHGQIILTATTAIVVLTVLLIGGSTGTMLEALQVVGSDSPIIESPLASITRTNFEGTNGYLSPEDEESSSGNKIKMRLQEFQRSAASFTALDKNYLTPFFTSQNEDEAMPLTLENMGLDDDDDRYSS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00137 445 MobiDBLite consensus disorder prediction 1 20 - -
Vian1g00137 445 PANTHER SODIUM/HYDROGEN EXCHANGER 189 264 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vian1g00137 445 Gene3D - 128 179 - -
Vian1g00137 445 PRINTS Na+/H+ exchanger signature 135 145 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vian1g00137 445 PRINTS Na+/H+ exchanger signature 95 103 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vian1g00137 445 PRINTS Na+/H+ exchanger signature 80 94 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vian1g00137 445 Pfam Sodium/hydrogen exchanger family 81 184 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vian1g00137 445 Pfam Sodium/hydrogen exchanger family 193 260 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00137 Vian-Chr1 1239149 1247213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00137 20 347 Antiporters AT3G05030 26.434 4.33e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00137 K14724 - gmx:100810105 593.193