Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00132 ATGGGATCACATGAGCATGGTGAAGGAGCCACGGATGCTGATTTTGATCGAGTTACGCAAGCTCATCATGAGTTCCTTCAATCCTACGTTGGAAGGGGTGGGGTAGTTCCCTCCGAGTCAGTGTTCAGAAAAGCCAGATATGGTGAAGACAGTATAATTGCGCATCTTGACACTGGTGTATGGCCAGAATCTCCAAGCTTTAGCGATGAGGGGATGGGACCCATACCATCACGATGGAAAGGAATTTGTCAACATGATATGACCGGATTCCGTTGCAACAGGAAGCTTATAGGGGCAAGGTACTTCAACAAAGGTTATCTTGCCGATTCAGGAAGCGAAGTAAAATTTAACAACACAGTACGAGACTACGAGGGTCATGGATCTCACACACTGTCAACAATAGGAGGAAACTTTGTTCCTGGGGCCAGCGTGTTTGGGTATGGAAATGGAACTGCCCAAGGTGGCTCTCCTAAGGCCCGGGGAGCAAGCCTTGCAAAAGCTATGCCGGAAAAGAAGCTTTACCCACTCATCAACGCTGCAGATGCAAAATTGGCCAATGAACCAGTTGAAAACGCTACTCTGTGTCTGAGAGGAACAATTGATCCTAAAAAGGCAGGTGGCAAAATATTGGTTTGCCTTAGAGGTATCAATGCAAGAATGGAAAAGAGTCTGGTTGCTTTGGATGCTGGTGCAGTTGGGATGATTCTTTGTAATGACGAGCCTAGTGGAAATGACCTTGTTGCTGATCCTCATCTCCTGCCTGCATCACAACTTACTTATAAAGACGGGCTTGCTATCTATGCCTACATGAATTCAACTGAGACTCCGCTAGGATATATTGAACCACCCGAGACTGAGTTGGGGATAAAGCCTGCTCCAATCATGGCAGCTTTCTCCTCAAGAGGGCCCAACACAGTCACGCCCGAGATCCTTAAGTGGTTTACAAATGGAGCAGCAGAAGGCCAAGAGAGGAAGAGAAGGAGATGA 987 0.4721 MGSHEHGEGATDADFDRVTQAHHEFLQSYVGRGGVVPSESVFRKARYGEDSIIAHLDTGVWPESPSFSDEGMGPIPSRWKGICQHDMTGFRCNRKLIGARYFNKGYLADSGSEVKFNNTVRDYEGHGSHTLSTIGGNFVPGASVFGYGNGTAQGGSPKARGASLAKAMPEKKLYPLINAADAKLANEPVENATLCLRGTIDPKKAGGKILVCLRGINARMEKSLVALDAGAVGMILCNDEPSGNDLVADPHLLPASQLTYKDGLAIYAYMNSTETPLGYIEPPETELGIKPAPIMAAFSSRGPNTVTPEILKWFTNGAAEGQERKRRR 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00132 328 Pfam Subtilase family 48 148 IPR000209 GO:0006508|GO:0008236
Vian1g00132 328 Gene3D Peptidase S8/S53 domain 51 162 IPR036852 GO:0004252|GO:0006508
Vian1g00132 328 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 172 312 IPR045051 -
Vian1g00132 328 SUPERFAMILY Subtilisin-like 45 159 IPR036852 GO:0004252|GO:0006508
Vian1g00132 328 Pfam PA domain 203 266 IPR003137 -
Vian1g00132 328 SUPERFAMILY PA domain 203 272 IPR046450 -
Vian1g00132 328 CDD PA_subtilisin_like 148 280 - -
Vian1g00132 328 Gene3D - 167 277 - -
Vian1g00132 328 FunFam subtilisin-like protease SBT1.5 152 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00132 Vian-Chr1 1186817 1191811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00132 147 312 Subtilisin-like Serine Gene Family AT2G04160 46.707 1.40e-45 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00132 - - gsj:114393449 365.155