Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00124 ATGGAGTACCCAGAAAGCAGCAGCGTGTGTGAGATAGAGGAGGAAGAGGAGAAAGAAGAAGAAAAAGAAGAACAAGACTGTGTTTATGTTGCAGTGGGTAAGAGCAACACAAGCATGCACGCTCTCTCATGGACACTCAACAACTTGGTTACTCAATCTACCATCATTTTTCTCATTCATGTATTTCCTCAGATCAAACACATTCCAAATCCCCGTTTTTGTGTGATTGTGATGACAGTGGGAGTAGGAATGGTTCCAAGGAATGAAGTGAGTGTTGAGCAGGTGGAGAGTTATGTTGAGCAAGAAAGAGGCAAGAGGAGAGAGCTCCTTCAGAAGTTCCTACAATCATGTTCTTCTTCCAAGGTTAAGGTAGACACCATCCTGATTGAGAGTGACCTGGTTGCAAAGCCTATCCTCGACCTCATTCCCATTCTTCAGATAAAAACTCTAGTCATTGGAGCCAACAAATTCCATCTGAGAAAATCAAAATCAAGGAAAGGGAATAATAGTGTTGCCGATGAGATACTGAGAAATTCACCAGAAAGTTGCAAGTCAAACAAGTCCCTTTCCCCGTATAACACAGGTTTACGCGTGAACTCATCTTTCAATGTTATGTATGATTCCACAAGAATCTAA 636 0.4182 MEYPESSSVCEIEEEEEKEEEKEEQDCVYVAVGKSNTSMHALSWTLNNLVTQSTIIFLIHVFPQIKHIPNPRFCVIVMTVGVGMVPRNEVSVEQVESYVEQERGKRRELLQKFLQSCSSSKVKVDTILIESDLVAKPILDLIPILQIKTLVIGANKFHLRKSKSRKGNNSVADEILRNSPESCKSNKSLSPYNTGLRVNSSFNVMYDSTRI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00124 211 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 5 184 - -
Vian1g00124 211 MobiDBLite consensus disorder prediction 1 23 - -
Vian1g00124 211 MobiDBLite consensus disorder prediction 7 23 - -
Vian1g00124 211 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 28 180 - -
Vian1g00124 211 Gene3D HUPs 21 182 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00124 Vian-Chr1 1126962 1130788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00124 28 162 U-box Gene Family AT4G25160 28.261 2.99e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00124 - - vra:106768035 286.189