Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00070 ATGGCGAAAGTGATTGTTGTTTCCGTAGGTTTACCATTGATAGCAGTGATTCTGATCTCCATGTTCATGGCTGCTATAACTTGTTTGAAGGAAGAAGAGCGTTCGATATATTTGGTCTTAATGGAAGGAGATGCACTTGCTTTTACTCAACAACCTTCCATTCAACAACATTCATCAACAATGCAATCCAACAGGGAAGCTTCAAAGACACATGCAAAGCACTTAATATCATCATCTCACGATCTATTTCTGCAAACAACGTTAGATACAGGAAGCTACAACAAACTCCACAGTTATAAACACATCATCAATGGTTTTTCTGTCCACACAACCCCTTCCCAGGCTGAAAGACTAAGAAGTAAGCCGGGAGTTAAGTTGGTAGAGAAAGACAGAGGAGTGAAAAAGATGACAACATACACACCTGAATTTCTAAGTTTACCAAATGGAATATGGGCGCAGGAAGGAGGAGAAACAAATGCAGGTGAAGGAGTTGTGATTGGTTTTGTGGATAGTGGCATCAACCCTTTTCATCCCAGCTTTGCTTACGATCCCATGCTACCTTTCAAATCAAACCTCTCTCGTTTTGAGGGTGCCTGCATGATGGGTCCTCTCTTCCCTCCTACTTCCTGCAATGGAAAGATAGTAGCCGCCAGGTATTTCTCTGCTGGGGCTGAAGCTGCTGCTACACTCGATCCTTCCAAGGATTTTCTTTCACCCTATGATGCAGATGGACATGGCAGTCATGTGGCATCTATTGCTGCTGGAAATGCTGGTGTTCCTGTTGTAGTCAACAGTTTTTGCTACGGGAAAGCTAGTGGAATAGCACCACGTGCAAGGATTGCTGTTTATAAGGCTATGTATCCATCCGTGGCAACTCTAGCAGATGTTATTGCTGCGATCGATCACGCTGTTCTGGATGGAGTGGATATCTTATCGCTATCTGTGGGACCAAACGGACCACCAGAACACACGTTAACATTCTTAAACATGTTTGACATTTCTTTGTTGTTTGCACGAAAAGCAGGAGTTCTCGTGGTGCAAGCTGCAGGGAACAACGGTCCCGCATCTTCAAGTGTAGTGTCATTCAGTCCTTGGAGTGTAACTGTTGCCGCTAGCACCACAAACAGAAGGTACCCTTCTTCACTTGTACTTGGAAATGGCGCAGTACTTAGTGGCGTGGGACTATCAGGACCAAGTTTTGGAAATGGATCAGTTTGGCATAAGCTTGTTTTAGCTAAGGATGCGGTCAAAATGAGTGGAACAAGACCAAAGACTGAGTACATTGAGGAGTGCCAACATCCAGATGTTTTGGACCCTCATATAGTGTTGGGAAGTATCATTATCTGCACATTCTCAGGTGGGTTCTATAATGGCACCTCAACTCTTGCTGGTATTATTGGCACCGTGAAGGCTCTGGGAATGGAGGGCTTTGTTTTAGTTGCGAACCCAAGCTATGGTGATTATATTGCAGAGCCAATGCCTTTTGCCTTTTCTGAAAAAACAAAGAGGAACAAGAAAGGAAATGGCAGAGAGTTTGGTGCTTTGGCAGCTGTGGGAGAAGGAAGACTTGCTTCTTTCACAGGAAGATCACCGATAGTCAGTAGATTTTCTTCAAGGGGTCCAGATATCATTGACAATAAAAAAAATGTTGCAGATGTTCTTAAACCTGATATTCTTGCTCCAGGACACCAAATCTGGGCGGCCTGGGCCCCCATGAGTGCCTCAGAACCTTTCCTCAGAGGGAACAGTTTTGCATTGTTATCTGGTACCAGCATGTCCACACCTCATGTGGCTGGAATAGCAGCACTGATGAAGCAACACAATCCATCATGGACTCCATCCATGATAGCTTCTGCGATCTCTACAACAAGCTCAAAGTATGACCATCTTGGACAGCCTATAATGGCAGAAGGCTATGAGGTCAACACCTTGCTACCGGCCACTCCTTTTGATTACGGCTCAGGCTTTGTCAACCCCAATCGTGCCGTTGATCCTGGTTTGGTACTTTCATCAGATTATGCAGACTTCATCAGCTTCCTGTGCTCTTTGCCGGACATAGACACGGATGCAGTCGTTGCAGCTACTGGAGAGCAATGCAATCACCCATTTGCCCATCCTTTCAGCCTAAACCTTCCTTCGGTTACAGTATCTGCGCTGAGAGGATCAGTTTCTGTCCGAAGAACTTTCACGAACGTGGGGAACACCACAGAGACGTACTTGGCCACTGTTCGTCCCCCAAATGGAACTGACATCTGCCTGTATCCAACTTGGTTTACCTTAACTCCGCAAGGAACGCAAGATTTGGATATACATATCAGTGTCGTCCAACCAATGCAGAATTTTACCTTTGGTGAAATTGTTCTCACAGGAAATTTAAACCACATTGTACGAATAACATTGTCAGTGTTCGCGATTTCAGTGTAA 2424 0.4493 MAKVIVVSVGLPLIAVILISMFMAAITCLKEEERSIYLVLMEGDALAFTQQPSIQQHSSTMQSNREASKTHAKHLISSSHDLFLQTTLDTGSYNKLHSYKHIINGFSVHTTPSQAERLRSKPGVKLVEKDRGVKKMTTYTPEFLSLPNGIWAQEGGETNAGEGVVIGFVDSGINPFHPSFAYDPMLPFKSNLSRFEGACMMGPLFPPTSCNGKIVAARYFSAGAEAAATLDPSKDFLSPYDADGHGSHVASIAAGNAGVPVVVNSFCYGKASGIAPRARIAVYKAMYPSVATLADVIAAIDHAVLDGVDILSLSVGPNGPPEHTLTFLNMFDISLLFARKAGVLVVQAAGNNGPASSSVVSFSPWSVTVAASTTNRRYPSSLVLGNGAVLSGVGLSGPSFGNGSVWHKLVLAKDAVKMSGTRPKTEYIEECQHPDVLDPHIVLGSIIICTFSGGFYNGTSTLAGIIGTVKALGMEGFVLVANPSYGDYIAEPMPFAFSEKTKRNKKGNGREFGALAAVGEGRLASFTGRSPIVSRFSSRGPDIIDNKKNVADVLKPDILAPGHQIWAAWAPMSASEPFLRGNSFALLSGTSMSTPHVAGIAALMKQHNPSWTPSMIASAISTTSSKYDHLGQPIMAEGYEVNTLLPATPFDYGSGFVNPNRAVDPGLVLSSDYADFISFLCSLPDIDTDAVVAATGEQCNHPFAHPFSLNLPSVTVSALRGSVSVRRTFTNVGNTTETYLATVRPPNGTDICLYPTWFTLTPQGTQDLDIHISVVQPMQNFTFGEIVLTGNLNHIVRITLSVFAISV 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00070 807 Gene3D - 375 526 - -
Vian1g00070 807 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 135 IPR037045 -
Vian1g00070 807 PRINTS Subtilisin serine protease family (S8) signature 241 254 IPR015500 -
Vian1g00070 807 PRINTS Subtilisin serine protease family (S8) signature 161 180 IPR015500 -
Vian1g00070 807 PRINTS Subtilisin serine protease family (S8) signature 588 604 IPR015500 -
Vian1g00070 807 ProSiteProfiles Serine proteases, subtilase domain profile. 141 663 - -
Vian1g00070 807 Pfam Subtilase family 161 627 IPR000209 GO:0006508|GO:0008236
Vian1g00070 807 CDD PA_subtilisin_like 381 492 - -
Vian1g00070 807 SUPERFAMILY Subtilisin-like 136 667 IPR036852 GO:0004252|GO:0006508
Vian1g00070 807 Gene3D - 680 804 - -
Vian1g00070 807 ProSitePatterns Serine proteases, subtilase family, histidine active site. 245 255 IPR022398 -
Vian1g00070 807 SUPERFAMILY Protease propeptides/inhibitors 93 133 - -
Vian1g00070 807 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 85 800 IPR045051 -
Vian1g00070 807 Pfam Peptidase inhibitor I9 67 134 IPR010259 -
Vian1g00070 807 CDD Peptidases_S8_3 133 625 IPR034197 -
Vian1g00070 807 ProSitePatterns Serine proteases, subtilase family, serine active site. 589 599 IPR023828 -
Vian1g00070 807 Pfam Fibronectin type-III domain 709 802 IPR041469 -
Vian1g00070 807 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 166 177 IPR023827 -
Vian1g00070 807 Gene3D Peptidase S8/S53 domain 163 676 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00070 Vian-Chr1 672390 677512 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00070 13 805 Subtilisin-like Serine Gene Family AT1G62340 55.502 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00070 - - gmx:100798915 1231.08