Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00031 ATGGATTACGAAGAACATCCGTCTCCCTCTATCCGTTCTTCCTCCCTTCTCAGGGACATCTCCAACTTCACCACTCCCAGACGGCCCCCTTTCTCTCTCACCACCGCCCCATCTCCCGCCACTCAATTCTTCACCGCCTCCAAACACGCAGCCACTTCCTCCTCCTTCCACCGCCGTCCCAACAAAGCATCCACCGCCACCACAGCCAAGAAATTCAAGGCCTTCCAATTGGAGCAGTCCCAGTCCTCCCGTAAGGCCCAAATCAAGAAAGAGCGCTCCCTCAAATCCCTCGCCAAGTCTCTCTCAGTATGGCTCAACTTTCTCCTCCAAAATCCTAATTCATGTGGCTGCCACTACTCTTCTGCGGATGCTTCCGCTCCCACTACCAATGGCAAGCGAGACGGCGCCCCGGTAATCTCCGTCATCGGCGTCGATTCCGCCTGGCGCACCCCCAAGCGCCAGAGGAAATCCTTGTCCAGCAAGGAAAATGCTGGGTCGGTGGCTGAGGTTCCTGATTCCTCATTTTCGCACCTCAGGGATTCTCTCGAGGACGTTTGCAGTTTTGATGATTTGAATCAGCGAATGAGCTTGTATTTCAGCCTTGCAGCTTGTAAGGAGATCTTCCTTCAAATGAATCGCGTCGCCAAGGCAATTGACGAAGGAAGACTGAATATGAAGGCACATTGCCCTATAGTAACTGATGTTGGCTTGAAGGATAAGGCCATGAGAATTCTCACGTGTTATAATTCTACTTGGTTGCGAATTGGATTGTATGTAATTTTTGGCGGTGACTCCTTGGTGTTAAATGGTGATGTGGATTCTGATCATGATGCTGTGTTCTTGAGAATGGTCGTTGACAAGTTATTTTTTTCGCATGAGGGTTTAGCTAAAGCTTATGCTTATAACAAAATGGTTGAAGGCGTGTATAGGTCAGGTTACTATGAGAATTTGGGGAATGTGATATTGAAGAGAATTTTGTTGCTTGTGCTTGTTCTGGATAAAGCTAAATGCCAGAGTTACCTCCCACTGGAGTACGGTATTGATGGATTGGATGGGGGTTCTCCTTTGTTATTCAAACCAGAATCCTGGATTAAATCAAGCAGTCAGCTGATTCATGGTTACAAATTATCTCATCAACAGGAACCTCTTGTCGAGTATGATTTCAGGATCAGAGATTTATTTGTAGATCTCCAAGATGGATTAAAACTGTGTAGAGCTATTCAGCTTTTGCAGCATAATTCTTCGATCCTCATGAAAATTGTAGTCCCCTCTGATACTCCTAAGAAAAAATTAGCAAACTGCAGTCTTGCCCTGCAATATATTAGGCAAGCTGGTGGGTCACTAGTTGATGAAGATGGCATGATGATTATGGCAGATGATATTGCTAATGGAGACAAAGAACTTACAGTTTCCTTGCTCTGGAATATATTTGTTCATTTGCAGGTGGCAGTTCTGTTTCGACTTATTTTTCAAGTTTCTGCATTACTACCTCTTTTGGTTGATAAAGCAAGTTTAGGAGGGGAAATTTCTAAAGTTCAAGGAGGCAAGGTTCCCGTAAACATTTCAAGTTCTAGCTCTATGGAATTGCTTTTGAATTGGATACAGGCAGTTTGTGACAACTATGATTGTGAAATTGACAATTTTCATTCCCTTGTTGATGGCAAAGCTGTCTGGTGCTTACTTGATTATTACTTCCAAAAAGAACTTCAAAATTCCTGTTCGTTGAAGGAAGTGAGTATAAAAAGTGGCAAGGCATCAATTATGTCTGTTGATGAATATTCAGATGCACTGTATAATTTTATACTATCCCAAAAGTTGACTACATTACTGGGGAACTTCCCAGAGAAATCAGAAATGGAGCCTGAACACTTCACACCTGAACCAGAGCCTAAACTCCCAACAGAAAAATGTTTTTCTCTCTGTACAGCGAAGCAAAAGTGCATAACCGACCTCAACAGGTGCCCTTCCCCCCTTTATGTTCCTGTCCTTCACTGCTATCCAGCAGGCCAACTCAATGCTGTACTTCAAATTAGTGAGCTACTTCAATATAATGGTGCTTGCAGTGACCGAAGTGTGGTGATTTTGTTGGTTTTCCTGGCAAGCCAATTATTTGTCAAGAAAAATTTGGATCACTTAAATTTCCACAAACTATTGGGTGATGACTGCCAAAGTCTGAACCATAGAAATTTGAGGATGCTAAGGTGCCTTTCAAATTCTGAATCCATACAAAAGCCTGATGCTTCCGATGTGCTTGACAATGAAGTTAACGATTGGTACTTCACATTTTTAGAAAATGCTACAAAAACAATACAACTGCATCTCAGAGGATGGGTTGCACGGTGCAAGTTTCTGAAGATGGTAAACTCGATTACCCTTTTACAAACTGTTTTCAGAGCTTGGCTAAAAGTGAGGCAAAAGTCAGCCTATGTGATATTATCAACTGTTCAAGGCTGTGACTCTTCATTTGAAATATTGAAGCAATCAGAAACATATAAGAGATACGTCATGCTTTTCATGTATAGACGTTCCTTTTTGAGGTTAAAGAGCTCAGCACAGATTATCCAGAAAGCAGTTAGGAGTTGGCTCTATAGGAGGCATAAGAAAGAGACTAGTACAAATCCGGATCTTTTGATTTCAGATATGATAGCGGCTGCTCTTAATGTTCAGAAATTGGTCCCTGGTGGGATGGGACAATCTAGATATATTCATCAGCTAGATCAGAGAGAGAAAGACTTATTTTTTTCCCAACTGAAAGTCACTTTCCATCTTCAAACAAATGCAGCCACTATCATTCAGCTTGCTTGGAAAAAGTTCATGTGCTGCAAGTCTGCTCAGAAGCAACACCTGTTTGCAACTAAAATTCAACGAAATTTCCGTAGGTGGTTATTGACAAAAAGTTTTTTAGAGCAGATTCAGGCTGCCGTAAAGATTCAATCTTATTTTCGAAGGTGGAGATGTGTGAATGCTTTTCAGCTCTTCAAGATTGAATTTAAGGCAGCTGTTGTTATTCAATCATGTATGCGGGGCTGGTTAGCCCGAAAGAATGCTGGTGCACGTAGGAATCACCTATTTGCAACTAAAATTCAGTTAAATTTCCACAGGTGGTTGTCGAGAAAAAGGTTTTTAAATCAGATTCAAGCTGTCATAAAAATTCAATCATATTTTCGAATGTGGAGATGTTTAAATGCTTTCCAGCACTTCAAAATTGAGTTTAAAGCAGCTGTTATCATTCAGTCTTGTTTACGGGGCTGGTTTGCCCGAAAAGATGCTTGTACGCGTAGGAAGGACATTGTTGAGATTCAAGTTGCTTTAATGATTCCAGAGGCACTGCCGTGGTTGGCTTGTAAAGAGGGACTTCTTGTTCCAAAAAGACGCTGTAATAAAGATCCAGTGTGTCGTTCGAAGTTTGAAGTGCCAAAAGGCTCTCAATTGCCAGAAAGATGCAGCTTTGGAGATCCAGCGCTTTATAAGGGGGCATGTAACTCGGAATCAGCTATTAGCGCTTCCAAGCTACGCACAGTTATTTCTGTTAGTTGCAGCTCAAAACCATTTGGCTTTTGTAGTTTTCAATTTGAACTGTTCTTGTTTTCGGTTGTGAAATTGCAACGATGGTGGAAGGGTCTCCTCTTGCTGAAGTTAATGAATAAATCGGCCATCATTATTCAGTCATGTACCCGTGGGTGGATAACCAGGCGAAATGCTACTCTTTATAGAAGCCATGTTGTCATCCAAGAAGATGCGGCGTTGTTGATTCAACGCTACATTAGGGGACATTTAACTCGACATCGGAGATTAGGTGGTGCTTCTAACCTAAGTGCAATCACTCCTGTTGGCTGCACCTCAGGGCCAGTTGGCTGTCGTAGTTTTCCACCAGATCAATTTTTGCTTTCAGTTGTGAAATTGCAACGATGGTGGAAGGGTCTCTTGTTACAGATATTGATGACAAAATCTGCTATTGTTATTCAGTCTTGTACTCGTGGGTGGATAGCCAGGCGAAAGGCTAATGTTCAGAGACATCGTATTATTGTCATCCAATCCTACTGGAAAGGTTACCATGCACGTAAAGTTTCGAAAGAACAGTTGTTGGATTTGCGCTTGAGAATGCAGAAGTCTGCCAGAAATGTGGATGACAGCAAGCGTCTCATAAACAGACTCTTGGCAGCGCTTTCGGAGCTACTCAATATGAAGAGTCTTAGTAACATCCTTCATACTTGTTCAATATTGGACATGGCTACAGGGCACTCTCAGAAATGTTGTGAAGAACTTGTGGCTGCCGGGGCCATTGATACTTTGCTGCGGCTGATTCAAACAGTCAGCCGGAGTATACCTGATCAGGAGGTTCTAAAGCATGCTTTGTCAACTCTCCGAAATCTCGCCCGCTATCCTCATCTTCTACAAGTGTTGATCCAAAGTCGTAGTTCTGTACAGATAATTGTGATGGAATTATTGAGGAATAAAAACGAGGGTTACTTCATTGCTTCTGAACTTCTGAAGAAGATATGTTCAACTGGCAAAGGCGTTGAGGCGATTTTGAAGTCCCCTGCTCTGCTAAAACGATTGCACGGCCTTGTCGAGGACCTTAAACGGAAGGGAATTTACGAGAAAAGAAATCCTAGGGCTGCTAACCTGGTTATCAAAGAAAACAGAGAGAGAAGATTGAAGGAGGCTGCTGAGATTGTTAAACTGATAACAAGGGCATGA 4701 0.4246 MDYEEHPSPSIRSSSLLRDISNFTTPRRPPFSLTTAPSPATQFFTASKHAATSSSFHRRPNKASTATTAKKFKAFQLEQSQSSRKAQIKKERSLKSLAKSLSVWLNFLLQNPNSCGCHYSSADASAPTTNGKRDGAPVISVIGVDSAWRTPKRQRKSLSSKENAGSVAEVPDSSFSHLRDSLEDVCSFDDLNQRMSLYFSLAACKEIFLQMNRVAKAIDEGRLNMKAHCPIVTDVGLKDKAMRILTCYNSTWLRIGLYVIFGGDSLVLNGDVDSDHDAVFLRMVVDKLFFSHEGLAKAYAYNKMVEGVYRSGYYENLGNVILKRILLLVLVLDKAKCQSYLPLEYGIDGLDGGSPLLFKPESWIKSSSQLIHGYKLSHQQEPLVEYDFRIRDLFVDLQDGLKLCRAIQLLQHNSSILMKIVVPSDTPKKKLANCSLALQYIRQAGGSLVDEDGMMIMADDIANGDKELTVSLLWNIFVHLQVAVLFRLIFQVSALLPLLVDKASLGGEISKVQGGKVPVNISSSSSMELLLNWIQAVCDNYDCEIDNFHSLVDGKAVWCLLDYYFQKELQNSCSLKEVSIKSGKASIMSVDEYSDALYNFILSQKLTTLLGNFPEKSEMEPEHFTPEPEPKLPTEKCFSLCTAKQKCITDLNRCPSPLYVPVLHCYPAGQLNAVLQISELLQYNGACSDRSVVILLVFLASQLFVKKNLDHLNFHKLLGDDCQSLNHRNLRMLRCLSNSESIQKPDASDVLDNEVNDWYFTFLENATKTIQLHLRGWVARCKFLKMVNSITLLQTVFRAWLKVRQKSAYVILSTVQGCDSSFEILKQSETYKRYVMLFMYRRSFLRLKSSAQIIQKAVRSWLYRRHKKETSTNPDLLISDMIAAALNVQKLVPGGMGQSRYIHQLDQREKDLFFSQLKVTFHLQTNAATIIQLAWKKFMCCKSAQKQHLFATKIQRNFRRWLLTKSFLEQIQAAVKIQSYFRRWRCVNAFQLFKIEFKAAVVIQSCMRGWLARKNAGARRNHLFATKIQLNFHRWLSRKRFLNQIQAVIKIQSYFRMWRCLNAFQHFKIEFKAAVIIQSCLRGWFARKDACTRRKDIVEIQVALMIPEALPWLACKEGLLVPKRRCNKDPVCRSKFEVPKGSQLPERCSFGDPALYKGACNSESAISASKLRTVISVSCSSKPFGFCSFQFELFLFSVVKLQRWWKGLLLLKLMNKSAIIIQSCTRGWITRRNATLYRSHVVIQEDAALLIQRYIRGHLTRHRRLGGASNLSAITPVGCTSGPVGCRSFPPDQFLLSVVKLQRWWKGLLLQILMTKSAIVIQSCTRGWIARRKANVQRHRIIVIQSYWKGYHARKVSKEQLLDLRLRMQKSARNVDDSKRLINRLLAALSELLNMKSLSNILHTCSILDMATGHSQKCCEELVAAGAIDTLLRLIQTVSRSIPDQEVLKHALSTLRNLARYPHLLQVLIQSRSSVQIIVMELLRNKNEGYFIASELLKKICSTGKGVEAILKSPALLKRLHGLVEDLKRKGIYEKRNPRAANLVIKENRERRLKEAAEIVKLITRA 1566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00031 1566 CDD CH_ASPM_rpt1 373 476 - -
Vian1g00031 1566 ProSiteProfiles IQ motif profile. 1244 1273 IPR000048 GO:0005515
Vian1g00031 1566 MobiDBLite consensus disorder prediction 8 38 - -
Vian1g00031 1566 Pfam IQ calmodulin-binding motif 1216 1233 IPR000048 GO:0005515
Vian1g00031 1566 Pfam IQ calmodulin-binding motif 1046 1061 IPR000048 GO:0005515
Vian1g00031 1566 Pfam IQ calmodulin-binding motif 849 866 IPR000048 GO:0005515
Vian1g00031 1566 Pfam IQ calmodulin-binding motif 1246 1263 IPR000048 GO:0005515
Vian1g00031 1566 Pfam IQ calmodulin-binding motif 1072 1089 IPR000048 GO:0005515
Vian1g00031 1566 Pfam IQ calmodulin-binding motif 765 783 IPR000048 GO:0005515
Vian1g00031 1566 Pfam IQ calmodulin-binding motif 951 967 IPR000048 GO:0005515
Vian1g00031 1566 Pfam IQ calmodulin-binding motif 972 990 IPR000048 GO:0005515
Vian1g00031 1566 Pfam IQ calmodulin-binding motif 1339 1355 IPR000048 GO:0005515
Vian1g00031 1566 Pfam IQ calmodulin-binding motif 1315 1333 IPR000048 GO:0005515
Vian1g00031 1566 Pfam IQ calmodulin-binding motif 998 1015 IPR000048 GO:0005515
Vian1g00031 1566 ProSiteProfiles IQ motif profile. 996 1025 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 1313 1335 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 1213 1235 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 1020 1042 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 785 808 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 1336 1358 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 1069 1091 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 995 1017 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 1043 1065 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 969 991 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 946 968 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 1243 1265 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 923 945 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 762 784 IPR000048 GO:0005515
Vian1g00031 1566 SMART iq_5 846 868 IPR000048 GO:0005515
Vian1g00031 1566 ProSiteProfiles IQ motif profile. 1070 1099 IPR000048 GO:0005515
Vian1g00031 1566 MobiDBLite consensus disorder prediction 1 38 - -
Vian1g00031 1566 Pfam Armadillo/beta-catenin-like repeat 1415 1460 IPR000225 GO:0005515
Vian1g00031 1566 ProSiteProfiles IQ motif profile. 763 791 IPR000048 GO:0005515
Vian1g00031 1566 ProSiteProfiles IQ motif profile. 1314 1341 IPR000048 GO:0005515
Vian1g00031 1566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 916 1016 IPR027417 -
Vian1g00031 1566 Gene3D - 997 1041 - -
Vian1g00031 1566 Gene3D - 1045 1090 - -
Vian1g00031 1566 Gene3D - 1369 1565 IPR011989 -
Vian1g00031 1566 ProSiteProfiles Calponin homology (CH) domain profile. 364 481 IPR001715 GO:0005515
Vian1g00031 1566 Pfam Calponin homology (CH) domain 389 480 IPR001715 GO:0005515
Vian1g00031 1566 ProSiteProfiles IQ motif profile. 1214 1241 IPR000048 GO:0005515
Vian1g00031 1566 SMART arm_5 1415 1460 IPR000225 GO:0005515
Vian1g00031 1566 Gene3D - 944 996 - -
Vian1g00031 1566 Gene3D - 763 809 - -
Vian1g00031 1566 Gene3D - 1213 1268 - -
Vian1g00031 1566 Gene3D - 1313 1362 - -
Vian1g00031 1566 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1426 1459 IPR000225 GO:0005515
Vian1g00031 1566 SUPERFAMILY Calponin-homology domain, CH-domain 327 572 IPR036872 -
Vian1g00031 1566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1294 1359 IPR027417 -
Vian1g00031 1566 Gene3D - 366 482 IPR036872 -
Vian1g00031 1566 PANTHER UNCHARACTERIZED 38 867 - -
Vian1g00031 1566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1027 1098 IPR027417 -
Vian1g00031 1566 SUPERFAMILY ARM repeat 1383 1526 IPR016024 -
Vian1g00031 1566 Gene3D - 522 609 IPR036872 -
Vian1g00031 1566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1194 1263 IPR027417 -
Vian1g00031 1566 ProSiteProfiles IQ motif profile. 1337 1365 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00031 982 1101 Myosins gene family AT4G33200 35.000 4.99e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00031 K16743 - gmx:100817636 2043.47