Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00024 ATGCTCCTCACGGACCTCCTTCTCTTCGCCTTCGGCCTCCTCTTCCTCCGTTGGTGGTGGCGCCGCTGGTCCACCACCGGGGGAGGCCCCAAGAACCTCCCCCCAGGGCCTCCCGGTTGGCCCATCGTCGGTAACCTCTTCCAAGTCGTCCTGCAGCGCCGTCACTTCATCTACGTAGTCCGCGACTTACGTAAGAAGTACGGCCCAATCTTCACCATGCAGATGGGCCAGCGCACGTTGATCATCGTCTCCAGCGCGGACCTCATCCACGAGGCTCTCATCCAGCGCGGCCCACAGTTCGCCAGCCGGCCCCAAGACTCCCCCATCCGTCTCATCTTCAGCATGGGGAAGTGCGCCATCAACTCCGCCGAGTACGGCCCTCTCTGGCGCACCCTCAGGAAGAACTTCGTCACCGAGATGATCACCCCGCTGAGGATCAAGCAGTGCAGTTGGATAAGAAAATGGGCCATGGAGGCCCACATTAGTAGGATCCAACGGGAGGCCCGTGAGCAAGGTTTCGTTGAAGTCATGAGCAACTGCAGACTCACCATCTGCAGCATCCTCATCTGCCTCTGCTTCGGCGCCAAGATAGAGGAGAGCCGAATCAAGAGTATAGAAAGCATCTTGAAGGACGTCATGCTCATCTCGCTCCCCAAGCTTCCAGACTTTTTGCCCGTGTTCACGCCGTTGTTCCGGCGCCAGGTGAAGGAGGCCAGAGAGTTGAGGAAAAGACAGGTCGAACTGTTGGCGCCGTTGATAAGGAATAGAAAGGCCTACGTGGAAGGGAGATTCTCCGGAGATGAAATGGCGAGTCCCGTTGGGGCTGCTTACTTGGACTCGTTGTTCGGGTTGGAGGTGCCTGGACGTGGACAGTTGGGGGAGGAAGAGCTCGTGACGCTCGTGTCGGAGGTTATCAGCGCCGGGACGGACACGAGCGCCACCGCGGTGGAGTGGGCGTTGTTTCATTTGGTGGTGGATCAAGAGATTCAGGAGAGGTTGTACAAAGAGATTGTGGACTGTGTGGGGAAGGACGGGGTGATTACGGAGAGTCACGTTGAGAGGATGCCTTACCTGAGCGCCGTGGTGAAGGAGACCTTCCGGCGTCACCCGCCGAGCCACTTCGTGCTGTCCCACGCTGCGACGGAGGATACTAAGCTGGGAGGGTATACGGTCCCGAAGAACGCGAGTGTGGAGTTTTACACGGCCTGGTTGACGGAGGATCCGAATATGTGGGAGGATCCGAATGAGTTCCGACCCGAAAGGTTTTTGAGCGGGGATGGGGTTGACGTGGACGTGACCGGAACGAAAGGTGTGAGGATGATGCCCTTCGGTATAGGGAGGAGGATTTGTCCGGCGTGGAGTTTAGGCATGGTGCATATAAACTTGTTATTGGCTAAGATGGTGCAGGCTTTCCACTGGTTGCCCAATCCCAACGCCCCACCCGACCCGGCTGAGATATTCGCTTTCACTGTTGTCATGAAGAACCCTCTCAAGGCGGTTATTGTTCCACGATCCATTTAA 1521 0.574 MLLTDLLLFAFGLLFLRWWWRRWSTTGGGPKNLPPGPPGWPIVGNLFQVVLQRRHFIYVVRDLRKKYGPIFTMQMGQRTLIIVSSADLIHEALIQRGPQFASRPQDSPIRLIFSMGKCAINSAEYGPLWRTLRKNFVTEMITPLRIKQCSWIRKWAMEAHISRIQREAREQGFVEVMSNCRLTICSILICLCFGAKIEESRIKSIESILKDVMLISLPKLPDFLPVFTPLFRRQVKEARELRKRQVELLAPLIRNRKAYVEGRFSGDEMASPVGAAYLDSLFGLEVPGRGQLGEEELVTLVSEVISAGTDTSATAVEWALFHLVVDQEIQERLYKEIVDCVGKDGVITESHVERMPYLSAVVKETFRRHPPSHFVLSHAATEDTKLGGYTVPKNASVEFYTAWLTEDPNMWEDPNEFRPERFLSGDGVDVDVTGTKGVRMMPFGIGRRICPAWSLGMVHINLLLAKMVQAFHWLPNPNAPPDPAEIFAFTVVMKNPLKAVIVPRSI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00024 506 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 FunFam Cytochrome P450 family protein 28 506 - -
Vian1g00024 506 SUPERFAMILY Cytochrome P450 34 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 Gene3D Cytochrome P450 29 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 12 504 - -
Vian1g00024 506 Pfam Cytochrome P450 34 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Vian1g00024 506 CDD CYP77_89 66 498 - -
Vian1g00024 506 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00024 506 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00024 Vian-Chr1 283704 285224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00024 1 505 Cytochrome P450 AT1G11600 67.843 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00024 K21995 - gmx:100783249 874.774