Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00003 ATGAAACGGGTTCAAAGAATAACCTTCACGCTGCAAGTTGCCAGAGAGTTGAGGAAAAGACAGGTCGAACTGTTGGCGCCGTTGATAAGGAATAGAAAGGCCTACGTGGAAGGGAGATTCTCCGGAGATGAAATGGCGAGTCCCGTTGGGGCTGCTTACTTGGACTCGTTGTTCGGGTTGGAGGTGCCTGGACGTGGACAGTTGGGGGAGGAAGAGCTCGTGACGCTCGTGTCGGAGGTTATCAGCGCTGGGACGGACACGAGCGCCACCGCGGTGGAGTGGGCGCTGTTTCATTTGGTGGTGGATCAAGAGATTCAGGAGAGGTTGTACAAAGAGATTGTGGACTGTGTGGGGAAGGACGGGGTGATTACGGAGAGTCACGTTGAGAGGATGCCTTACCTGAGCGCCGTGGTGAAGGAGACCTTCCGGCGTCACCCGCCGAGCCACTTCGTGCTGTCCCACGCTGTGACAGAGGATACTAAGCTGGGAGGGTATACGGTCCCGAAGAACGCGAGTGTGGAGTTTTACACGGCCTGGTTGACGGAGGATCCGAATATGTGGGAGGATCCGAATGAGTTCCGACCCGAAAGGTTTTTGAGCGGGGATGGGGTTGACGTGGACGTGACCGGAACGAAAGGTGTGAGGATGATGCCCTTCGGTATAGGGAGGAGGATTTGTCCGGCGTGGAGTTTAGGCATGGTGCATATAAACTTGTTATTGGCTAAGATGGCGCAGGCTTTCCACTGGTCGTCCATCGCGCCTAAAGCAAGAATCATTTCCCCTTCCTCATCGACGACGACTAGAATCACTTTGACGCATCTCCTCAACAGATGTCTTCTTTCTAAGTTTGAGCGGAACATGTGA 864 0.5417 MKRVQRITFTLQVARELRKRQVELLAPLIRNRKAYVEGRFSGDEMASPVGAAYLDSLFGLEVPGRGQLGEEELVTLVSEVISAGTDTSATAVEWALFHLVVDQEIQERLYKEIVDCVGKDGVITESHVERMPYLSAVVKETFRRHPPSHFVLSHAVTEDTKLGGYTVPKNASVEFYTAWLTEDPNMWEDPNEFRPERFLSGDGVDVDVTGTKGVRMMPFGIGRRICPAWSLGMVHINLLLAKMAQAFHWSSIAPKARIISPSSSTTTRITLTHLLNRCLLSKFERNM 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00003 287 Gene3D Cytochrome P450 2 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00003 287 Pfam Cytochrome P450 15 253 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00003 287 PRINTS E-class P450 group I signature 216 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00003 287 PRINTS E-class P450 group I signature 226 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00003 287 PRINTS E-class P450 group I signature 135 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00003 287 PRINTS E-class P450 group I signature 92 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00003 287 PRINTS E-class P450 group I signature 72 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00003 287 PRINTS E-class P450 group I signature 176 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00003 287 SUPERFAMILY Cytochrome P450 9 255 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00003 287 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 219 228 IPR017972 GO:0005506|GO:0016705
Vian1g00003 287 PRINTS P450 superfamily signature 136 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00003 287 PRINTS P450 superfamily signature 83 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00003 287 PRINTS P450 superfamily signature 217 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g00003 287 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00003 Vian-Chr1 19508 20701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00003 14 249 Cytochrome P450 AT1G11600 64.854 1.45e-106 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00003 K21995 - gmx:100787281 420.624