Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01669 ATGGATGATGGAAATGCTGAGCTTTCTGATAAGCTTTCAAATAATGTTCTATTTTTGAATCCAGAGTCATCTAGCAGTTTTCAGGCTTCAGCATCAGTGAACACAGTTCCTGAATTATGTAGGAGTAGCAGCAGAACATGCACCCACACTCACACTTGCAACCCACCTGGCCCTGATGCTGCTCACACACACACATGCTATCACACTCACACCCAAATTTTTGAACCTGAAGATGATGACCACAAGGAGCACACCAACTCCAAATCAAAAAGGCCTTCTGGCAACCGAGAAGCAGTTAGGAAGTATAGGGAGAAGAAGAAGGCACACACAGCATACTTGGAGGAGGAAGTTAAGAAATTGCGTTTGGTGAATCAGCAACTAGCGAGAAAACTACAAGGGCAGGCACTTCTTGAAGCAGAATTGGCAAGGTTGAGGAGCATTTTGGCACACCTAAAGGGGAAAATAGACAGTGAATTGGGTGCTTTCCCCTTTCAGAAGCAGTGTAACTCTTACATTCTGAAAGAAGGGGATGCTGGTTTGCTTTCTACTGCAAGGACATATGGCCTTCAGTGTCAGAACAAGTTGCCATGCTTTCATCCACATGCAGGATCATCATCCCAGGTCAACATCTGTGCATATGGAAAGTCCGTGAGTCCATGGGAAGGAAACTGCCAACCTGAAATTGTAGATTGTCATGTTGATGCAAATAACTTGACCAGTACTGAAGGACAAACTGTTGAGACAGTGGATAACTTCTTGTCATCTGCATCTCAAGAGTGA 780 0.4436 MDDGNAELSDKLSNNVLFLNPESSSSFQASASVNTVPELCRSSSRTCTHTHTCNPPGPDAAHTHTCYHTHTQIFEPEDDDHKEHTNSKSKRPSGNREAVRKYREKKKAHTAYLEEEVKKLRLVNQQLARKLQGQALLEAELARLRSILAHLKGKIDSELGAFPFQKQCNSYILKEGDAGLLSTARTYGLQCQNKLPCFHPHAGSSSQVNICAYGKSVSPWEGNCQPEIVDCHVDANNLTSTEGQTVETVDNFLSSASQE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01669 259 Gene3D - 75 152 - -
Vian11g01669 259 CDD bZIP 88 142 - -
Vian11g01669 259 MobiDBLite consensus disorder prediction 74 101 - -
Vian11g01669 259 Pfam Basic region leucine zipper 87 140 IPR004827 GO:0003700|GO:0006355
Vian11g01669 259 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 85 151 IPR004827 GO:0003700|GO:0006355
Vian11g01669 259 MobiDBLite consensus disorder prediction 74 105 - -
Vian11g01669 259 SMART brlzneu 83 150 IPR004827 GO:0003700|GO:0006355
Vian11g01669 259 SUPERFAMILY Leucine zipper domain 86 132 IPR046347 GO:0003700|GO:0006355
Vian11g01669 259 PANTHER CCAAT/ENHANCER BINDING PROTEIN 20 163 IPR031106 GO:0003700|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01669 Vian-Chr11 27365202 27365981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01669 1 214 bZIP Transcription Factor Family AT2G16770 43.220 5.27e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian11g01669 bZIP_2 2.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01669 K25785 - gmx:100527780 371.318