Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01654 ATGGGTTCTAACTGTGAAGAGATTAATGGTGAAGAAAATGATCCATGCCTATCTGCTATGCTTCTAAGCTTCGGCCCAATGGTTTACACTGCTGTGTTGAATGCTGCCATTGAGCTCAACTTGTTCGAGATCATTGCTAAAGCAACAACAACAACCACAGCCCCATTTGGCGTTTCAGCTTCTGAGATTGCTTCTCGGCTTCCAATTCAGCACAAAAAACTGGCCCAAAGGCTTGATCGCATGCTGTCTGTTCTTGGAAGTCACTCTCTTCTCACTTGCTCTACACTCACAAATCAAGATGGTAAGGTCCAAAGACTCTTTCAGCTTTCAGCTTCCGGAAAGTACTTCATCAATGCAGAAGCCACTGCTTCTTTGGCCTTGTTCACAACGTTTATGAATCATCCAAAGCTTGTTCAGGCATTCCTTAATTTCAAGGAGATACTTCTTGACTGTGATAAGGGCCTATACATGAAAGTTCATGGAATGCCTATTTTTGAAGGCATACAATCTGATCCAACATGGAATCATATCTTCAATGAAGCAATGGCCAATATATGCAGAATAGAGATGACAAAGATACTTGAAATATACAGTGGATTTGAAGGAATATCACTGCTTATTGATGTGGGAGGAGGAGTAGGGCAAAGTTTGAATATCATAATCTCTAAGTATCCTTCCATAAAGGGTGTCAACTTTGATCTTCCACAAGGCATATTGCACAATTGGTCGGATGAAAATTGTTTGAAAGTTCTAAATAATTGCTACAAAGCATTGCCAGAAAATGGAAAGGTGGTTGTTGTAGATTTCATAATGCCTGAAGCAATTGGTTCTTCTGAAGCAGATAAGATGGTTACTAGCTTTGATAACCTGATGTTTCTTGATGGAGGAAGTGAAAGAACAGAAAAAGAGTTTATGAATTTATGCCAAATTTCTGAATTTTCTTCTTTCAGAGTTGTTTCTCGTGCCTTTACTGCTCTTGGAGTAATGGAATTTTATAAATAA 1002 0.3892 MGSNCEEINGEENDPCLSAMLLSFGPMVYTAVLNAAIELNLFEIIAKATTTTTAPFGVSASEIASRLPIQHKKLAQRLDRMLSVLGSHSLLTCSTLTNQDGKVQRLFQLSASGKYFINAEATASLALFTTFMNHPKLVQAFLNFKEILLDCDKGLYMKVHGMPIFEGIQSDPTWNHIFNEAMANICRIEMTKILEIYSGFEGISLLIDVGGGVGQSLNIIISKYPSIKGVNFDLPQGILHNWSDENCLKVLNNCYKALPENGKVVVVDFIMPEAIGSSEADKMVTSFDNLMFLDGGSERTEKEFMNLCQISEFSSFRVVSRAFTALGVMEFYK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01654 333 Pfam O-methyltransferase domain 238 311 IPR001077 GO:0008171
Vian11g01654 333 Pfam O-methyltransferase domain 154 236 IPR001077 GO:0008171
Vian11g01654 333 Gene3D - 2 116 IPR036388 -
Vian11g01654 333 PIRSF O-mtase 1 238 IPR016461 GO:0008168
Vian11g01654 333 PIRSF O-mtase 236 333 IPR016461 GO:0008168
Vian11g01654 333 SUPERFAMILY "Winged helix" DNA-binding domain 11 118 IPR036390 -
Vian11g01654 333 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 322 IPR029063 -
Vian11g01654 333 Gene3D Vaccinia Virus protein VP39 118 237 IPR029063 -
Vian11g01654 333 FunFam Caffeic acid 3-O-methyltransferase 3 116 - -
Vian11g01654 333 Gene3D Vaccinia Virus protein VP39 238 321 IPR029063 -
Vian11g01654 333 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 333 IPR016461 GO:0008168
Vian11g01654 333 Pfam Dimerisation domain 32 85 IPR012967 GO:0046983
Vian11g01654 333 PANTHER O-METHYLTRANSFERASE 30 323 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01654 Vian-Chr11 27231667 27233047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01654 1 323 Monolignol Biosynthesis Gene Families AT5G54160 38.122 4.63e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01654 - - gmx:100784030 499.975