Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01650 ATGGTTCAAAGAAAGGTTCCTGGCAAGCTTGGAATCCAAGCTGAACATGTTAAATCAGACAAGAGGTTGGCAAATATGAAGCTATCTTCATCTCAGCACCAAGATGGCAAAAGTAGAGGAGCTGATATGAAGAAGAAAATCAGAAAATCAAGGTCAATAAACCTTTCTGATCTTGAGGCTCTTCAATCATCATCATCATCACCTTCAAGGAGAAGCTTGTCTCAACCAGGAAAGCCACCCCCTCTTCACACTCCAACCACTGCTGCATCAGCATCACCTCAGAAGCAGCAATCTTTGTTCAGAACAACAGATGTTTCACCCAATTACATGAAGCCAACAAGCAGTTCGCATGCAAAAAAGGAACTTTTCCCGGTAAGCCACAGGAACTCTCAATCTGGTTCTGATTTTAAGAATCTTCCGAGAAAATTTTCTACTGATTCCAAAGCTGCCTGTGCTAAAAAACCTGCCAAAGCCTTGGCAAGGTCGTCTAGTTTGAGTTTGGTCAGAACATTGACAAAAACCACTACTTTCAAGGCTTCTAGAGCCTGTCCTAGAAAATCCTCCAGGGCTGTTATGTGTGCAGATATGACTGCACCACAGAGAGCCACTTGTTCTTCAACTTTGAAGGACTCAAAGTTCCCTTCGTACCTCATGCTTAGCCCTGGGGCAACTGAGTCAGAGGGAACTTCAGCCATGAAGGTTTGCCCTTACACGTATTGTTCCCTTAATGGTCATCATCATGTTGATTTGCCGCCATTGAAGAGCTTCATGTCAGCTAGGAGGCGCCTTCTGAAGACGCAGAAGCGCGCCAAGCTTGAAGCTCTCAGCCCTCGGAGACTGAAGGTTCCCCTTGAGACAGATAAGAAGGACTCTGATGTTGAGCAGAACGTTTTTGAGGAAAAACCTGCTTGCGATGAAATTGGCATTGATATCTTCATTGAAATCTATGCCAATGAAAAGGATGCAACACCAACAGGAGCAGAAGAAATAGGGAGAAGAGATTTTCTCAAAGAGATTGAGGATCAAGCAGATAACAAGTCACCAATTGAAGATAATGGCGTAGCAGCAAGAACCGTTGGTTTTCCTTCTCCCTCTGTACGTGAACTTGATCTTGAGGAGGATTTGAAAAAGCCCTTTGATGACGTTGCAATCGAAGTAGATACCAACGGCAACTTTCTCCAAGAACAAAGTTCACAAGATGCAGATGAAGATCACCAACCAACTGTCTGGTGTCATGAAGAAATGAGCATGGGAAGCTACTGCAGCGATGGGGAACAAGACATGGGGGATGTTGACATGGATGATTCTGATTCCAGAACCTATGAAATGGAGTGGAAGGAGGAGATATTTTGTGGATTCGATCACGAAGAGGATGCTGATTCTTCTGTTTACACAGAAGAGGACAACGACTCAAGAGTTGAGTCCTCATCAGAGAGTTCTCATGATGTGTCAGTGACATGGTTAGATGACATCCTTGGCAGCTACTATGAGGACTTTCTGGTTGATGAAACACACAAAAAGGCCAATTCAGAAGAAAACACCCATTTTGAAGAATCTACTGGGATTAGTTCCGTCCTTGAAGACACAAATGGAAGCATTGAAACCAAAGAAATCGAGTACTCCTCCACGGGTTGTGACCAATCTTCATTTACAGAGGAAATATTTGAGTATATGACAAATGCACTAGATAATAGTGGAGAAGATGAGAAACATGTGGATGATGAGGCCGGTTGCAACTCAAAGACACTTGATGAACAGACATTTGACAGCACTCAGAATCAGAAGATGAGTGATACTAGCACAACTGACGAGACAAGTGAAGATGGATGTTCAAGCAGCCTAGAGAACAATGATGAGAGCAGTACAATGGAGAGGGAAATTGAGTTGGTGGATGTGTCTGAGGAATGTAACATGACTGATCAAGATCAGTATTTGTTGGAAAAAGACCAAGGTAAAGGTAGAAGGTTCCAAAGAACAAGTTGCATAGATAGTGAAGATGAAAACACAAGCAAGAATTGGAAAGGTTCAATTAGGAGAAAGAGGGTTGTTGAAGATGATGACGAGATGAGAAAGTTCAACCCCAAAGAGCCAAATTTCCTGCCTTTGGTTCCTGAACCAGAAAAAGAAAAGGTTGACCTGAAGCATCAAATGATGGATGAGAGAAAGAATTCGGAGGAATGGATGCTTGATTGTGCACTCAGACAAGCTGTGACAAAACTTGCACCAGCTAGGAAGAAGAAGGTGGCACTGCTAGTTGAAGCCTTTGAAACGGTGATGCCAGCACCCAAATGTGAAAACCGTTTGAGAAACAATTCAGCATTTGGTCATGCAGGAAGAATTCAAGCTTGTAGCTGA 2355 0.4314 MVQRKVPGKLGIQAEHVKSDKRLANMKLSSSQHQDGKSRGADMKKKIRKSRSINLSDLEALQSSSSSPSRRSLSQPGKPPPLHTPTTAASASPQKQQSLFRTTDVSPNYMKPTSSSHAKKELFPVSHRNSQSGSDFKNLPRKFSTDSKAACAKKPAKALARSSSLSLVRTLTKTTTFKASRACPRKSSRAVMCADMTAPQRATCSSTLKDSKFPSYLMLSPGATESEGTSAMKVCPYTYCSLNGHHHVDLPPLKSFMSARRRLLKTQKRAKLEALSPRRLKVPLETDKKDSDVEQNVFEEKPACDEIGIDIFIEIYANEKDATPTGAEEIGRRDFLKEIEDQADNKSPIEDNGVAARTVGFPSPSVRELDLEEDLKKPFDDVAIEVDTNGNFLQEQSSQDADEDHQPTVWCHEEMSMGSYCSDGEQDMGDVDMDDSDSRTYEMEWKEEIFCGFDHEEDADSSVYTEEDNDSRVESSSESSHDVSVTWLDDILGSYYEDFLVDETHKKANSEENTHFEESTGISSVLEDTNGSIETKEIEYSSTGCDQSSFTEEIFEYMTNALDNSGEDEKHVDDEAGCNSKTLDEQTFDSTQNQKMSDTSTTDETSEDGCSSSLENNDESSTMEREIELVDVSEECNMTDQDQYLLEKDQGKGRRFQRTSCIDSEDENTSKNWKGSIRRKRVVEDDDEMRKFNPKEPNFLPLVPEPEKEKVDLKHQMMDERKNSEEWMLDCALRQAVTKLAPARKKKVALLVEAFETVMPAPKCENRLRNNSAFGHAGRIQACS 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01650 784 MobiDBLite consensus disorder prediction 37 53 - -
Vian11g01650 784 MobiDBLite consensus disorder prediction 564 580 - -
Vian11g01650 784 MobiDBLite consensus disorder prediction 456 477 - -
Vian11g01650 784 MobiDBLite consensus disorder prediction 125 139 - -
Vian11g01650 784 MobiDBLite consensus disorder prediction 581 618 - -
Vian11g01650 784 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 760 IPR044681 GO:0005516
Vian11g01650 784 MobiDBLite consensus disorder prediction 564 623 - -
Vian11g01650 784 MobiDBLite consensus disorder prediction 456 482 - -
Vian11g01650 784 SMART CaM_binding_2 648 760 IPR012417 GO:0005516
Vian11g01650 784 MobiDBLite consensus disorder prediction 1 139 - -
Vian11g01650 784 MobiDBLite consensus disorder prediction 85 115 - -
Vian11g01650 784 MobiDBLite consensus disorder prediction 55 73 - -
Vian11g01650 784 Pfam Plant calmodulin-binding domain 655 760 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01650 Vian-Chr11 27206127 27208481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01650 629 784 Calmodulin-binding Proteins AT2G38800 43.125 4.35e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01650 - - gmx:102660315 1126.69